DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8993 and dhd

DIOPT Version :9

Sequence 1:NP_647716.1 Gene:CG8993 / 38301 FlyBaseID:FBgn0035334 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster


Alignment Length:104 Identity:32/104 - (30%)
Similarity:58/104 - (55%) Gaps:2/104 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VQSAEDFDKKVKNSQQPVIV-DFFATWCNPCKLLTPRIESIVGEQAGSIKLAKVDIDEHSELALD 100
            |::..|:.|:::.:...:|| ||:||||.|||.:...::|:..:.:....:.|:|:|:..||...
  Fly     4 VRTMNDYHKRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTER 68

  Fly   101 YDVAAVPVLVVLQNGKEVQRMVGLQDEDKIRAWVAAAVK 139
            |.|.::|..|.|:..:.:....| .||.|:...:|..||
  Fly    69 YKVRSMPTFVFLRQNRRLASFAG-ADEHKLTNMMAKLVK 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8993NP_647716.1 Thioredoxin_like 39..138 CDD:294274 29/99 (29%)
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 23/76 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464321
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.750

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