DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8993 and trx-1

DIOPT Version :9

Sequence 1:NP_647716.1 Gene:CG8993 / 38301 FlyBaseID:FBgn0035334 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001021885.1 Gene:trx-1 / 181863 WormBaseID:WBGene00015062 Length:115 Species:Caenorhabditis elegans


Alignment Length:91 Identity:31/91 - (34%)
Similarity:52/91 - (57%) Gaps:3/91 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DFDKKVKNSQQPVIV-DFFATWCNPCKLLTPRIESIVGEQAGSIKLAKVDIDEHSELALDYDVAA 105
            ||::.::...:.:|: ||:||||.|||.:.|..:.:.....|.| ..|||:||..:|...|||..
 Worm    17 DFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELATTHKGII-FCKVDVDEAEDLCSKYDVKM 80

  Fly   106 VPVLVVLQNGKEVQRMVGLQDEDKIR 131
            :|..:..:||..::.:.|.. ||::|
 Worm    81 MPTFIFTKNGDAIEALEGCV-EDELR 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8993NP_647716.1 Thioredoxin_like 39..138 CDD:294274 31/91 (34%)
trx-1NP_001021885.1 Thioredoxin 16..111 CDD:278513 31/91 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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