Protein Alignment MsR1 and srw-11

DIOPT Version :10

• Sequence 1: NP_001261324.1
• Gene: MsR1 / 38298
• FlyBaseID: FBgn0035331
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001024058.1
• Gene: srw-11 / 3564862
• WormBaseID: WBGene00005758
• Length: 374
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 75/407 - (18%)
• Similarity: 134/407 - (32%)
• Gaps: 138/407 - (33%)

  Fly    37 ILGTIANTLNIIVLTRREMRSP-TNAILTGLAVADL----------AVMLEYIPYTIHDYILTDS 90
            |....:|..::.:|..:|:||. :..|:.|:.:|||          ||.|..:|.|   |.:...
 Worm    49 IASCFSNLFHLFILLHKELRSSGSYTIMIGICIADLTIAIISLENFAVKLSLLPET---YPIPPQ 110

  Fly    91 LPREEKLSYSWACFIKFHSIFAQV---LHTISIWLTVTLAVWRYIAVGYPQKN--------RVWC 144
            ..|.:     :..||....:..||   ...:|:||.:.|...|.::|.:..|.        ||..
 Worm   111 CLRSD-----YKSFIPLLRLRQQVDTLGRRLSVWLAILLVFIRAVSVKFHMKRWVEKINKPRVAI 170

  Fly   145 GMRTTIITITTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDYRNELLSART 209
            .|.|.:.|..       |......:|.|.:....|.:|...||:
 Worm   171 YMMTGVATFW-------LFFDSWQFLFTTVFWLPDNVDDICKVL--------------------- 207

  Fly   210 AALNATPTSAPLNETVWLNASTLLTSTTTAAPPTPSPVVRNVTVYRLYHSDLALHNASLQNATFL 274
                                              |...::.:.||.:        ..:.|.....
 Worm   208 ----------------------------------PEKYIKQIHVYAI--------PTNFQRIVSY 230

  Fly   275 IY--SVVIKLIPCIALTILSVRLILALLEAKRRRKKLTSKPATPGASNGTKSPANGKAADRPRKN 337
            |:  |..:|::..|....|:|.|.:.|....|||::|:       .:|..::..|
 Worm   231 IFELSSQLKIMAAICHLSLTVYLSIQLRTILRRRRRLS-------GTNNVEAAVN---------- 278

  Fly   338 SKTLEKEKQTDRTTRMLLAVLLLFLITEFPQGIMGLLNAV--LGDVFYLQCYLRLSDLMDILALI 400
                         |:::|.:.:.|.||:    .:|.|..:  .||...::.......:.:.|..:
 Worm   279 -------------TKLILFISIAFSITQ----CVGALTVIDYSGDAISIKIITTALTISNNLRTL 326

  Fly   401 NSSINFILYCSMSKQFR 417
            ||..|..:...||.|::
 Worm   327 NSISNVFVCYFMSVQYK 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MsR1	NP_001261324.1	7tmA_FMRFamide_R-like	28..420	CDD:410630	75/407 (18%)
		TM helix 1	28..53	CDD:410630	3/15 (20%)
		TM helix 2	59..84	CDD:410630	10/34 (29%)
		TM helix 3	105..135	CDD:410630	8/32 (25%)
		TM helix 4	147..167	CDD:410630	3/19 (16%)
		TM helix 5	269..294	CDD:410630	6/26 (23%)
		TM helix 6	345..375	CDD:410630	6/29 (21%)
		TM helix 7	388..413	CDD:410630	4/24 (17%)
srw-11	NP_001024058.1	7tm_GPCRs	49..353	CDD:475119	75/407 (18%)
		TM helix 2	73..100	CDD:410628	8/26 (31%)
		TM helix 3	121..146	CDD:410628	6/24 (25%)
		TM helix 4	171..194	CDD:410628	6/29 (21%)
		TM helix 5	226..249	CDD:410628	4/22 (18%)
		TM helix 6	279..299	CDD:410628	6/23 (26%)
		TM helix 7	314..339	CDD:410628	4/24 (17%)