Protein Alignment MsR1 and frpr-6

DIOPT Version :10

• Sequence 1: NP_001261324.1
• Gene: MsR1 / 38298
• FlyBaseID: FBgn0035331
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_872220.1
• Gene: frpr-6 / 353447
• WormBaseID: WBGene00017661
• Length: 349
• Species: Caenorhabditis elegans
• Alignment Length: 417
• Identity: 88/417 - (21%)
• Similarity: 157/417 - (37%)
• Gaps: 132/417 - (31%)

  Fly    30 YVSLV---VCILGTIANTLNIIVLTRREMRSPTNA-ILTGLAVADLAVMLEYIP-YTIHDYILTD 89
            |||::   :.::|.:.|.|::.|.|...||..|.| :|..|::.|:.|:|..:| |:|      .
 Worm     9 YVSMIYLPIILVGLVGNGLSLYVYTTPNMRKSTVAFLLYSLSICDIFVLLFALPLYSI------S 67

  Fly    90 SLPREEKLSYSWA---CFIKFHSIF----AQVLHTISIWLTVTLAVWRYIAVGYPQKNRVWCGMR 147
            .||..:.:..:|:   .||.|.:.|    .....|.|:::.|.:.|.|:|||..|.:..:||..:
 Worm    68 YLPIWDNVYGAWSMRRMFIAFSTKFFYPLCMTAKTASLYIMVVITVERWIAVCRPLQVHIWCTFK 132

  Fly   148 TTIITITTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDYRNELLSARTAAL 212
            .::..:.......:::..|..:                         :|.|.|.:        ||
 Worm   133 NSVRIVIAIITFSIILNFPKFF-------------------------EYQIGYSD--------AL 164

  Fly   213 NATPTSAPLN-ETVWLNASTLLTSTTTAAPPTPSPVVRNVTVYRLYHSDLALHNASLQNATFLIY 276
            ...|....|: |..|                         ..|..|               |:|.
 Worm   165 GYWPKRGILDAEEHW-------------------------WYYISY---------------FIII 189

  Fly   277 SVVIK-LIPCIALTILSVRLILALLEAKRRRKKLTSKPATPGASNGTKSPANGKAADRPRKNSKT 340
            ||:.. |:|.:.:.|.::::|..|.::::.|..||:                            :
 Worm   190 SVIFDYLLPFVIMFIANMKVINELRKSRKERALLTT----------------------------S 226

  Fly   341 LEKEKQTDRTTRMLLAVLLLFLITEFPQGIMGLLNAVLGDVF-----YLQCYLRLSDLMDILALI 400
            |:||:   .||.|||.|.:||....|....:.|..::..|..     |.:..:.:|   :||.:|
 Worm   227 LQKEQ---NTTVMLLVVTILFGFCHFFSMALKLFESIFKDFLNRHNEYFEVMIEVS---NILIVI 285

  Fly   401 NSSINFILYCSMSKQFRTTFTLLFRPK 427
            :....|.:|...|.:||.....||:.:
 Worm   286 HIGTTFFIYYFFSARFRNILCYLFKKR 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MsR1	NP_001261324.1	7tmA_FMRFamide_R-like	28..420	CDD:410630	86/408 (21%)
		TM helix 1	28..53	CDD:410630	8/25 (32%)
		TM helix 2	59..84	CDD:410630	10/26 (38%)
		TM helix 3	105..135	CDD:410630	10/33 (30%)
		TM helix 4	147..167	CDD:410630	0/19 (0%)
		TM helix 5	269..294	CDD:410630	7/25 (28%)
		TM helix 6	345..375	CDD:410630	10/29 (34%)
		TM helix 7	388..413	CDD:410630	6/24 (25%)
frpr-6	NP_872220.1	7tmA_FMRFamide_R-like	9..305	CDD:410630	86/408 (21%)
		TM helix 1	9..35	CDD:410630	8/25 (32%)
		TM helix 2	41..67	CDD:410630	10/31 (32%)
		TM helix 3	90..120	CDD:410630	8/29 (28%)
		TM helix 4	132..152	CDD:410630	0/19 (0%)
		TM helix 5	183..208	CDD:410630	8/39 (21%)
		TM helix 6	228..258	CDD:410630	12/32 (38%)
		TM helix 7	273..298	CDD:410630	6/27 (22%)