DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR1 and CG33639

DIOPT Version :9

Sequence 1:NP_001261324.1 Gene:MsR1 / 38298 FlyBaseID:FBgn0035331 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001027070.1 Gene:CG33639 / 32803 FlyBaseID:FBgn0053639 Length:455 Species:Drosophila melanogaster


Alignment Length:512 Identity:108/512 - (21%)
Similarity:190/512 - (37%) Gaps:164/512 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NNETEPLYC----GSGM--------------------DNFHTSYKN---------MHGYVSLVVC 36
            |.|.:|.||    ||.:                    |:|:...::         .:|.|..::|
  Fly     7 NTEEDPAYCSFIWGSNLTSSVDVLAANATSVFSSDLRDDFYRDVEDPRTESLREYCYGLVLPIIC 71

  Fly    37 ILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTIHDYILTDSLPREEKLSYSW 101
            .:|.|.|.||::|||||.||......:...:.|.|..::..||:.|...:..|....||      
  Fly    72 AMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEE------ 130

  Fly   102 ACFIKFHSIFAQVLHT-------------ISIWLTVTLAVWRYIAVGYPQKNRVWCGMRTTIITI 153
                     |....:|             :.:.:.:.|.:.||::|.:|...|...|....::.:
  Fly   131 ---------FGPAFYTAHLELYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFL 186

  Fly   154 TTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDYRNELLSARTAALNATPTS 218
            |.  :..|:|..||::              .|::|..|..:..|..|...               
  Fly   187 TC--LATVIVYLPSIF--------------RGELIKCILGSSDVYVYLRR--------------- 220

  Fly   219 APLNETVWLNASTLLTSTTTAAPPTPSPVVRNVTVYRLYHSDLALHNASLQNATFLIYSVVIKLI 283
               :.|::                      :....||:|.               ::..|:.||:
  Fly   221 ---DNTIY----------------------QQTIFYRVYK---------------IMLEVIFKLV 245

  Fly   284 PCIALTILSVRLILALLE-AKRRRKKLTSKPATPGASNG-------TKSPANGKA---ADRPRKN 337
            |.:.:..|::|:::.... .:||||.:.|:|...|..:|       ....|:|..   .|.|||.
  Fly   246 PTLVIGGLNMRIMMVYRRTCERRRKMVLSRPHAQGHGHGHGHGHGHGHGHAHGHGYLKDDDPRKF 310

  Fly   338 SKTLEKEKQTDRTTRMLL-AVLLLFLITEFPQGIMGLLNAVLGDV---FYLQCYLRLSDLMDILA 398
            ::        :|...:|| :..:|||:...|..|:.:  .:..:|   |..|.:...::|::   
  Fly   311 AE--------ERRLFLLLGSTSILFLVCVSPMAILHM--TIASEVYPSFPFQVFRASANLLE--- 362

  Fly   399 LINSSINFILYCSMSKQFRTTFTLLFR-PKFLDKWLPVAQDEMAA---ARAERSAVA 451
            |||.|:.|.:||..|:.||.|.....: |....|:...|:.|::|   |.|...|||
  Fly   363 LINYSLTFYIYCLFSEDFRNTLVRTIKWPWLKGKFCHQAEHEVSASPPATAGTVAVA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR1NP_001261324.1 7tm_4 30..427 CDD:304433 88/425 (21%)
CG33639NP_001027070.1 7tm_1 77..>278 CDD:278431 53/286 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467302
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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