Protein Alignment MsR1 and srw-88

DIOPT Version :9

• Sequence 1: NP_001261324.1
• Gene: MsR1 / 38298
• FlyBaseID: FBgn0035331
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001317729.1
• Gene: srw-88 / 188199
• WormBaseID: WBGene00005835
• Length: 379
• Species: Caenorhabditis elegans
• Alignment Length: 442
• Identity: 91/442 - (20%)
• Similarity: 169/442 - (38%)
• Gaps: 123/442 - (27%)

  Fly    30 YVSLVVCILGTIANTLNIIVLTRREMR-SPTNAILTGLAVADLAVMLEYIPYTIHDYILTDS--- 90
            :.:.:..:||.|..:.::::||::.|| |..|:|:.|:|:.||..|...:.....:..|..:
 Worm    42 FFNKIFSVLGVILISFHLLILTKKSMRISSVNSIMIGIAICDLLSMGNMVRSEFFEINLQGTHCK 106

  Fly    91 LPREEKLS-YSWACFIKFHSIFAQVLHTISIWLTVTLAVWRYIAVGYPQKN--RVWC---GMRTT 149
            .|...:|: ::|     |.:.|...|...|.||.|.:.:.||:.:....||  |..|   |.|.:
 Worm   107 PPASLRLTQFNW-----FLTSFHTGLRRCSFWLGVIIVLVRYLIITNVLKNSFRFSCPKFGYRIS 166

  Fly   150 IITITTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDYRNELLSARTAALNA 214
            ||:...:.::.||....  |....|:::...||..
 Worm   167 IISFLLSTILSVLFFFQ--YQFVEISKWAPGLDCG------------------------------ 199

  Fly   215 TPTSAPLNETVWLNASTLLTSTTTAAPPTPSPVVRN---VTVY-RLYHSDLALHNASLQNATFLI 275
                   .|:::|.:                   ||   .:|| ||.:...|:|:........:|
 Worm   200 -------LESIYLES-------------------RNYPEFSVYGRLCNEFSAIHDGLFHRIQAVI 238

  Fly   276 YSVVIKLIPCIALTILSVRLILALLEAKRRRKKLTSKPATPGASNGTKSPANGKAADRPRKNSKT 340
            ..:..|.|||:.|.:|::.||:.|                                   |.:.:.
 Worm   239 EGIFGKFIPCVLLPVLTMMLIMKL-----------------------------------RSSDQN 268

  Fly   341 LEKEKQTDRTTRMLLAVLLLFLITEFPQGIMGLLNAVLGDVFYLQCYLR-LSDLMDILALINSSI 404
            ..:.::.||.|.:::.:.:.:|:||.|...:.|.:|:.......|..:: |..|.:.:....:||
 Worm   269 AARNQKKDRATVIVIFIAITYLLTELPLAFVYLADAIWHYDKNAQTIIKHLELLCNAIYTATASI 333

  Fly   405 NFILYCSMSKQFRTTFTLLF--RPKFLDKW--LPVAQDEMAAARAERSAVAP 452
            :.::...||..:|.|...|.  |..|.||.  ||      |:.::..|.:.|
 Worm   334 DCVICFVMSTAYRKTVRELLPRRLYFFDKTTNLP------ASKQSRLSRITP 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MsR1	NP_001261324.1	7tm_4	30..427	CDD:304433	83/413 (20%)
srw-88	NP_001317729.1	7TM_GPCR_Srw	42..353	CDD:370978	81/408 (20%)
		TM helix 2	73..97	CDD:320109	7/23 (30%)
		TM helix 3	118..140	CDD:320109	8/26 (31%)
		TM helix 4	164..180	CDD:320109	4/15 (27%)
		TM helix 5	233..256	CDD:320109	7/22 (32%)
		TM helix 6	276..301	CDD:320109	7/24 (29%)
		TM helix 7	317..342	CDD:320109	4/24 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910