DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR1 and srw-72

DIOPT Version :9

Sequence 1:NP_001261324.1 Gene:MsR1 / 38298 FlyBaseID:FBgn0035331 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001309457.1 Gene:srw-72 / 184734 WormBaseID:WBGene00005819 Length:347 Species:Caenorhabditis elegans


Alignment Length:418 Identity:84/418 - (20%)
Similarity:150/418 - (35%) Gaps:131/418 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YVSLVVCILGTIANTLNIIVLTRREMR-SPTNAILTGLAVADLAVMLEYIPYTIHDYILTDSLPR 93
            ||..||.|.|.|....::.:|||:.|| |.||:|:.|:|:.|:.|:||.|....:.:.:.:: |.
 Worm    18 YVEFVVSIFGFIFTLPHLFILTRKSMRTSCTNSIMMGIAIVDIIVLLEIILNRAYGFWILEN-PC 81

  Fly    94 EEKLSYSWACFIKFHSIFAQVLHTISIWLTVTLAVWRYIAVGYPQKNRVWCGMRTTIITITTAYV 158
            ....||::..|:.............|..|.|.|.:.|.|..    |.|   |...::.:....|:
 Worm    82 LNYESYNFELFLLIGEFLGDTGERTSFCLGVFLVLIRLIIT----KLR---GSADSLSSSVFGYI 139

  Fly   159 VCVL------VVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDYRNELLSARTAALNATPT 217
            |.:|      ::|.|.|....:.|:......|.|.| .:|..                       
 Worm   140 VFILLLILHSLISYSFYSTFFLREWPFSWKPNEKCI-ELPQN----------------------- 180

  Fly   218 SAPLNETVWLNASTLLTSTTTAAPPTPSPVVRNVTVYRLYHSDLALHNASLQNATFLIYSVVIKL 282
               .:|.|::.||.:                           |:.|.:.:   ..:...:.:.|:
 Worm   181 ---YSEKVYIRASKV---------------------------DIILFDPA---ECYNFITGLSKI 212

  Fly   283 IPCIALTILSVRLILALLEAKRRRKKLTSKPATPGASNGTKSPANGKAADRPRKNSKTLEKEKQT 347
            :..:...:|::.|||.:.::.:....|:.|.|                              |:.
 Worm   213 VVSVMYPVLALMLILDIRKSAKTASSLSEKRA------------------------------KER 247

  Fly   348 DRTTRMLLAVLLLFLITEFPQGIM------------GLLNAVL--GDVFY--LQCYLRLSDLMDI 396
            ..:.||:|.:.:.:.|...|.||.            .||..:|  |.:|:  |.|:         
 Worm   248 YHSGRMILVMTIFYTIASAPGGIANFIEVYIEIPTDSLLMVILGQGSIFFQALFCF--------- 303

  Fly   397 LALINSSINFILYCSMSKQFRTTFTLLF 424
                ||:.:.::..|||..:|.|..:.|
 Worm   304 ----NSASHCLINFSMSTNYRNTVKMAF 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR1NP_001261324.1 7tm_4 30..427 CDD:304433 84/418 (20%)
srw-72NP_001309457.1 7TM_GPCR_Srw 18..329 CDD:287314 84/418 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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