Protein Alignment MsR1 and dmsr-4

DIOPT Version :10

• Sequence 1: NP_001261324.1
• Gene: MsR1 / 38298
• FlyBaseID: FBgn0035331
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001368505.1
• Gene: dmsr-4 / 183924
• WormBaseID: WBGene00017038
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 460
• Identity: 127/460 - (27%)
• Similarity: 194/460 - (42%)
• Gaps: 111/460 - (24%)

  Fly     9 EPLYCG--SGMDNFHTSYKNMHGYVSLVVCILGTIANTLNIIVLTRREM-RSPTNAILTGLAVAD 70
            :|...|  ..::.|.:.|...|.|..|.:||:|..:|.::|.||:|..| |...|::||.:|..|
 Worm    21 DPAVSGLIDALEQFQSFYTYFHRYACLFICIVGVFSNAIHIAVLSRPRMRRCAVNSVLTAVAFCD 85

  Fly    71 LAVMLEYIPY--------TIHDYILTDSLPREEKLSYSWACFIKFHSIFAQVLHTISIWLTVTLA 127
            :..|..|..|        |.|.|            ||.|..|:|||...:..||.|::::...||
 Worm    86 VITMTSYSIYLMRFRFYETDHGY------------SYIWLVFLKFHVWSSMTLHAITLYMGGALA 138

  Fly   128 VWRYIAVGYPQKNRVWCGMRTTIITITTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIP 192
            ..|:.|:|  ..:..|...|.:........||..:|..|:|                  |::.|
 Worm   139 FIRWQALG--NIHSKWLQPRNSWQLFGVVSVVLSIVCLPTL------------------VLHKI- 182

  Fly   193 MTQYVIDYRNELLSARTAALNATPTSAPLNETVWLNASTLLTSTTTAAPPTPSPVVRNVTVYRLY 257
               |.|:......|..:..|..:..|.|......||.||
 Worm   183 ---YEIESPEIETSTVSEVLRLSGQSIPKEVRYSLNFST-------------------------- 218

  Fly   258 HSDLALHNASLQNATFLIYSVVIKLIPCIALTILSVRLILALLEAKRRRKKLTSKPATPGASNGT 322
                  ::.:.......:.::|:|.|||..|...::.|::.|.:...:|..|.||..
 Worm   219 ------YSCAFFKFNLWMLAIVLKAIPCALLLWFTIALVVKLRQTDEKRNYLYSKSF-------- 269

  Fly   323 KSPANGKAADRPRKNSKTLEKEKQTDRTTRMLLAVLLLFLITEFPQGIMGLLNAV-LGDV-FYLQ 385
                        ||:.|   |....||||.||:.:|::||:||.|||.:.|||.: .||| .|:
 Worm   270 ------------RKHVK---KTTVPDRTTYMLIIMLVVFLVTELPQGFLALLNGLYTGDVNIYI- 318

  Fly   386 CYLRLSDLMDILALINSSINFILYCSMSKQFRTTF-TLLFRPKFLDKWLPVAQDEMAAAR-AERS 448
             |..||:|:|.|:|||.|::|:|||.||.::|.|| .:|.|   ::.||....:....|| .::.
 Worm   319 -YKNLSELLDFLSLINCSVDFLLYCVMSSRYRQTFGHMLIR---VESWLRNHGERRRLAREIKKK 379

  Fly   449 AVAPV 453
            ..|||
 Worm   380 LPAPV 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MsR1	NP_001261324.1	7tmA_FMRFamide_R-like	28..420	CDD:410630	112/402 (28%)
		TM helix 1	28..53	CDD:410630	10/24 (42%)
		TM helix 2	59..84	CDD:410630	9/32 (28%)
		TM helix 3	105..135	CDD:410630	10/29 (34%)
		TM helix 4	147..167	CDD:410630	4/19 (21%)
		TM helix 5	269..294	CDD:410630	6/24 (25%)
		TM helix 6	345..375	CDD:410630	15/29 (52%)
		TM helix 7	388..413	CDD:410630	13/24 (54%)
dmsr-4	NP_001368505.1	7tmA_FMRFamide_R-like	40..352	CDD:410630	112/404 (28%)
		TM helix 1	41..67	CDD:410630	10/25 (40%)
		TM helix 2	74..99	CDD:410630	8/24 (33%)
		TM helix 3	116..146	CDD:410630	10/29 (34%)
		TM helix 4	156..176	CDD:410630	4/19 (21%)
		TM helix 5	224..249	CDD:410630	6/24 (25%)
		TM helix 6	277..307	CDD:410630	15/29 (52%)
		TM helix 7	320..345	CDD:410630	13/24 (54%)