DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR2 and MsR1

DIOPT Version :9

Sequence 1:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001261324.1 Gene:MsR1 / 38298 FlyBaseID:FBgn0035331 Length:556 Species:Drosophila melanogaster


Alignment Length:556 Identity:333/556 - (59%)
Similarity:394/556 - (70%) Gaps:51/556 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NMSQPHYCGTGIDDFHTNYKYFHGYFSLIVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVAD 68
            |.::|.|||:|:|:|||:||..|||.||:||||||||||||||||||||||||||||||||||||
  Fly     6 NETEPLYCGSGMDNFHTSYKNMHGYVSLVVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVAD 70

  Fly    69 LAVMLEYIPYTVHDYILSVRLPREEQLSYSWACFIKFHSVFPQVLHTISIWLTVTLAVWRYIAVS 133
            |||||||||||:|||||:..|||||:|||||||||||||:|.||||||||||||||||||||||.
  Fly    71 LAVMLEYIPYTIHDYILTDSLPREEKLSYSWACFIKFHSIFAQVLHTISIWLTVTLAVWRYIAVG 135

  Fly   134 YPQRNRIWCGMRTTLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDANGKTIASVPLSQYILDY 198
            |||:||:|||||||:|||.||||||||||||.|||:|||.::::.||.|||.|.|:|::||::||
  Fly   136 YPQKNRVWCGMRTTIITITTAYVVCVLVVSPSLYLITAITEYVDQLDMNGKVINSIPMTQYVIDY 200

  Fly   199 NRQDEVTMQVMSSTTPDVSWAIPSDSANGTAVSL-LSLTTVIPLTTLSTGVTTSS----SLGERN 258
            ..      :::|:.|.         :.|.|..|. |:.|..:..:||.|..||::    |...||
  Fly   201 RN------ELLSARTA---------ALNATPTSAPLNETVWLNASTLLTSTTTAAPPTPSPVVRN 250

  Fly   259 VTVYKLYHSALALRDRQFRNATFLIYSVLIKLIPCFALTILSVRLIGALLEAKRRRKILACH--- 320
            ||||:||||.|||.:...:|||||||||:||||||.||||||||||.||||||||||.|...   
  Fly   251 VTVYRLYHSDLALHNASLQNATFLIYSVVIKLIPCIALTILSVRLILALLEAKRRRKKLTSKPAT 315

  Fly   321 --AANDMQPIVNGKVVIPTQP-KSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLL 382
              |:|..:...|||..  .:| |:.|.||||||||||||||||||||||:||||||||||||.:|
  Fly   316 PGASNGTKSPANGKAA--DRPRKNSKTLEKEKQTDRTTRMLLAVLLLFLITEFPQGIMGLLNAVL 378

  Fly   383 GDAFFLQCYLKLSDLMDILALINSSINFILYCSMSRQFRSTFALLFRPRWLDKWLPLSQHDGEGR 447
            ||.|:|||||:||||||||||||||||||||||||:|||:||.|||||::||||||::|.:....
  Fly   379 GDVFYLQCYLRLSDLMDILALINSSINFILYCSMSKQFRTTFTLLFRPKFLDKWLPVAQDEMAAA 443

  Fly   448 VGGSGGLGGYGGYGRQRLLHTDAVSKSMAIDLGLTTQVTNV-XQESSGRAAM------------- 498
            ......:......|||:   ...|..|...::   |||||: .:.|.||..:             
  Fly   444 RAERSAVAPVLEKGRQQ---PQVVMASTTTNI---TQVTNLXHRRSRGRRTLLSRLLSVLKRGRR 502

  Fly   499 -SAAAGGAAASVALALAATDVDGCPPATDAAVSTND 533
             |:..||........||..  |...||..|.|...|
  Fly   503 RSSGEGGGVGGGGAPLAGN--DAVEPAFQAIVVVVD 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR2NP_001261323.1 7tm_4 28..429 CDD:304433 285/411 (69%)
MsR1NP_001261324.1 7tm_4 30..427 CDD:304433 287/413 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473006
Domainoid 1 1.000 79 1.000 Domainoid score I5618
eggNOG 1 0.900 - - E1_2BWNV
Homologene 1 1.000 - - H45310
Inparanoid 1 1.050 107 1.000 Inparanoid score I4898
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100685at6656
OrthoFinder 1 1.000 - - FOG0010012
OrthoInspector 1 1.000 - - mtm8429
orthoMCL 1 0.900 - - OOG6_109662
Panther 1 1.100 - - P PTHR46273
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X861
1211.800

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