DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR2 and srw-107

DIOPT Version :9

Sequence 1:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_503232.2 Gene:srw-107 / 187831 WormBaseID:WBGene00005854 Length:366 Species:Caenorhabditis elegans


Alignment Length:431 Identity:79/431 - (18%)
Similarity:148/431 - (34%) Gaps:127/431 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DDFHTNYKYFHGYFSLIVCILGTIANTLNIIVLTRREMR-SPTNAILTGLAVADLAVMLEYIPYT 79
            |.|..|:        ::.|| ..|||..:.:|:||:.|| |..|.::.|:::.::..||.    .
 Worm    23 DAFLVNF--------ILACI-SLIANIFHFVVITRKSMRISSVNVLMIGVSICNIFRMLT----A 74

  Fly    80 VHDYILSVRLPREEQL---SYSWACFIKFHSVFPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIW 141
            ::.|:..|.|...|.:   ||....|..............|.|:.:.:|..|.|.:      |..
 Worm    75 IYRYLELVDLEYPECITSDSYLKMYFDIISWWLQDYFRRCSSWMEIFIATARLIIM------RDM 133

  Fly   142 CGMRTTLITIATAYVVCVLVV--------SPWLYLVTAIAKFLETLDAN-GKTIASVPLSQYILD 197
            ...|.|........|:.:|:|        ..|||.|..:.....:|.:| .:....:.:|::|||
 Worm   134 SSARNTNAAKPKLGVILMLLVFFASGAVQGIWLYTVKVVENQAHSLYSNCAEHQDVIKVSRFILD 198

  Fly   198 YNRQDEVTMQVMSSTTPDVSWAIPSDSANGTAVSLLSLTTVIPLTTLSTGVTTSSSLGERNVTVY 262
            ...:..                                                           
 Worm   199 LRPESN----------------------------------------------------------- 204

  Fly   263 KLYHSALALRDRQFRNATFLIYSVLIK-LIPCFALTILSVRLIGALLEAKRRRKILACHAANDMQ 326
              |...:.:|       |:.|..|:.. .:|..||.||::.|:..:...|:.|.           
 Worm   205 --YGKLVLIR-------TYFILDVICSHFLPSLALPILTLFLLREMRIIKQSRS----------- 249

  Fly   327 PIVNGKVVIPTQPKSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLLGDAFFLQCY 391
                      |..:|..:::.|::....|:::..:.:...:.:.|.|.:|:....:.....|..:
 Worm   250 ----------TLQRSGVVVDNEEKYGLPTKLIALLTITSFLADTPLGCIGIAKAFIQQGTKLMRF 304

  Fly   392 LKLSDLM---DILALINSSINFILYCSMSRQFRSTFALLFR 429
              |:||:   :||....:..:.::...||.|:|.|...|.|
 Worm   305 --LTDLIVYFNILTTAMTIFHPVMCLLMSSQYRITARKLLR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR2NP_001261323.1 7tm_4 28..429 CDD:304433 75/417 (18%)
srw-107NP_503232.2 7TM_GPCR_Srw 27..345 CDD:370978 77/427 (18%)
TM helix 2 56..81 CDD:341315 5/28 (18%)
TM helix 3 101..131 CDD:341315 5/35 (14%)
TM helix 4 145..165 CDD:341315 3/19 (16%)
TM helix 5 211..236 CDD:341315 9/31 (29%)
TM helix 6 262..292 CDD:341315 4/29 (14%)
TM helix 7 306..331 CDD:341315 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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