DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR2 and srw-124

DIOPT Version :9

Sequence 1:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_503810.2 Gene:srw-124 / 183440 WormBaseID:WBGene00005871 Length:368 Species:Caenorhabditis elegans


Alignment Length:426 Identity:90/426 - (21%)
Similarity:147/426 - (34%) Gaps:149/426 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YFHGYFSLIVCILGTIANTLNIIVLTRREMR-SPTNAILTGLAVADLAVMLEYIPYTVHDYILSV 87
            |..||. ..|.||..:.|.|::.:|||:.|| |..|.::..:|:.|:...|.:|...:       
 Worm    37 YITGYV-YEVSILSILINILHLFILTRKSMRTSSINILMAAVALFDIFASLVHIQLFL------- 93

  Fly    88 RLPREEQLSY-SWACF--IKFHSVFPQVLHTI--------SIWLTVTLAVWRYIAVSYP-QRNRI 140
                 ||.|| .:.||  ..:..|..:.|..:        |.||.|.:|:.|.:.:..| ....|
 Worm    94 -----EQYSYLIFKCFPTDTYGLVLTRTLLIVVKDFSRRCSTWLIVFIALIRTLIIRNPLSPKHI 153

  Fly   141 WCGM-RTTLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDANGKTIASVPLSQYILDYNRQDEV 204
            ..|. :.:||.||.   :|.      ..|..:|.||.|.              |::.        
 Worm   154 LLGKPKASLIVIAG---ICA------ANLPISIFKFFEI--------------QFVF-------- 187

  Fly   205 TMQVMSSTTPDVSWAIPSDSANGTAVSLLSLTTVIPLTTLSTGVTTSSSLGERNVTVYKLYHSAL 269
                                                       ||.|........:.|.:..|.|
 Worm   188 -------------------------------------------VTISKHHCAPEGSYYFIASSEL 209

  Fly   270 ALRDRQFRNATFLIY-SVLIKLIPCFALTILSVRLIGALLEAKRRRKILACHAANDMQPIVNGKV 333
            .|||..|....|..: |.:..:|||..|.|::..|:..||:.:::     |.|            
 Worm   210 FLRDNGFLAKYFNFFNSFMSDMIPCILLPIVTCLLVMDLLKTRKK-----CRA------------ 257

  Fly   334 VIPTQPKSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIM-----------GLLNVLLGDAFF 387
                     ::..|...:...|.::..|.::|.:.|||.|:.           |:.|:|   .||
 Worm   258 ---------RISAKNNNSRGKTGLVFCVAIMFFIVEFPFGLSVGSAWLFMSSPGVQNIL---NFF 310

  Fly   388 LQCYLKLSDLMDILALINSSINFILYCSMSRQFRST 423
                   ..:..:|..:|:..:.|:...:|.|:|||
 Worm   311 -------GYMFTVLISVNACTHLIVCLIVSSQYRST 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR2NP_001261323.1 7tm_4 28..429 CDD:304433 88/422 (21%)
srw-124NP_503810.2 7TM_GPCR_Srw 41..347 CDD:370978 88/422 (21%)
TM helix 2 71..93 CDD:320109 5/21 (24%)
TM helix 3 116..138 CDD:320109 5/21 (24%)
TM helix 4 163..179 CDD:320109 6/24 (25%)
TM helix 5 219..242 CDD:320109 7/22 (32%)
TM helix 6 267..293 CDD:320109 7/25 (28%)
TM helix 7 308..333 CDD:320109 5/31 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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