DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MsR2 and dmsr-7

DIOPT Version :9

Sequence 1:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_504431.2 Gene:dmsr-7 / 178922 WormBaseID:WBGene00016428 Length:429 Species:Caenorhabditis elegans


Alignment Length:423 Identity:118/423 - (27%)
Similarity:190/423 - (44%) Gaps:93/423 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FHTNYKYFHGYFSLIVCILGTIANTLNIIVLTRREMR-SPTNAILTGLAVADLAVMLEYIPYTVH 81
            |...|:..|||..:::|:.|...|.:::.||:|..|| |..|.|||.:||.|:..|..|:.|.:|
 Worm    27 FQRWYQPIHGYVCVLICVFGIFTNFVHVAVLSRPNMRNSAVNCILTAVAVCDIGTMASYLIYIIH 91

  Fly    82 DYILSVRLPREEQLSYSWACFIKFHSVFPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIWCGMRT 146
             ::|..........::||..|:.:|.|....|||.|:||.|.:|..|.:.:.....|..|...:.
 Worm    92 -FVLRRNNSCTPTFTHSWLQFLLWHVVLSITLHTTSLWLAVAMAFIRRMTLRVTALNSQWQRPKF 155

  Fly   147 TLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDAN----GKTIASVPLSQYILDYNRQDEVTMQ 207
            ........|:|..::..|.: ||..||:    ::.|    |||     ..::..:|:.       
 Worm   156 AWKLCLGIYMVVFVLCIPNM-LVHEIAR----VEGNDWRPGKT-----CQKFASNYSE------- 203

  Fly   208 VMSSTTPDVSWAIPSDSANGTAVSLLSLTTVIPLTTLSTGVTTSSSLGERNVTVYKLYHSALALR 272
                                            |:.|                  :.:.|:|....
 Worm   204 --------------------------------PVYT------------------FMVSHAATINN 218

  Fly   273 DRQFRNATFLIYSVLIKLIPCFALTILSVRLIGALLEA-KRRRKI--LACHAANDMQPIVNGKVV 334
            .|.|:...::| .:|.|:|||..|..||..|:..:.:| |.|||:  :..:|:.|.:|       
 Worm   219 CRLFKWNIWMI-GILFKIIPCILLIFLSFGLVSKIRDAEKHRRKLTSVPSNASTDSKP------- 275

  Fly   335 IPTQPKSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLLGDAFFLQCYLKLSDLMD 399
                     |.:|...:||||.||:.:||:||:|||||||:.:|..:.........|..:.|::|
 Worm   276 ---------LKKKNGTSDRTTLMLVVILLVFLITEFPQGIISILCAIFTTDVHRYLYFYIGDVLD 331

  Fly   400 ILALINSSINFILYCSMSRQFRSTFALLFRPRW 432
            :|:|:|||:||:|||.||.::|.||..:..|.|
 Worm   332 LLSLVNSSVNFVLYCVMSSRYRQTFWEVIIPSW 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR2NP_001261323.1 7tm_4 28..429 CDD:304433 112/408 (27%)
dmsr-7NP_504431.2 7tmA_FMRFamide_R-like 33..356 CDD:320109 112/407 (28%)
TM helix 1 35..59 CDD:320109 8/23 (35%)
TM helix 2 68..90 CDD:320109 10/21 (48%)
TM helix 3 113..135 CDD:320109 9/21 (43%)
TM helix 4 158..174 CDD:320109 2/15 (13%)
TM helix 5 223..246 CDD:320109 8/23 (35%)
TM helix 6 284..309 CDD:320109 17/24 (71%)
TM helix 7 324..349 CDD:320109 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BWNV
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45310
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D343117at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4802
orthoMCL 1 0.900 - - OOG6_109662
Panther 1 1.100 - - O PTHR46273
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X861
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.780

Return to query results.
Submit another query.