DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsR2 and gpr142

DIOPT Version :10

Sequence 1:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_001340684.3 Gene:gpr142 / 100000501 ZFINID:ZDB-GENE-130603-30 Length:362 Species:Danio rerio


Alignment Length:448 Identity:92/448 - (20%)
Similarity:150/448 - (33%) Gaps:192/448 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YFSLIVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPRE 92
            |:|.::|: |...|.|.::.|.|..:|  |...|                     |:..:.|...
Zfish    34 YYSALLCV-GVPVNILTLVALYRLVVR--TQKAL---------------------YVYLLALTGS 74

  Fly    93 EQLSYSWACFI-------KFHSVFPQVL-----------HTISIWLTVTLAVWRYIA-------- 131
            :.||..:..|:       .||...|.:|           :..|||.||.|.|.||:|        
Zfish    75 DILSQLFIIFVGFLLETAVFHRDVPVLLLRSVSMMEFSANHASIWATVPLTVDRYVALCHPLLHR 139

  Fly   132 -VSYPQRNRIWCGMRTTLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDANGKTIASVPLSQYI 195
             :|||.|.|               .::.|::                       |:|        
Zfish   140 QISYPARAR---------------RIIAVVL-----------------------TLA-------- 158

  Fly   196 LDYNRQDEVTMQVMSSTTPDVSWAIPSDSANGTAVSLLSLTTVIPLTTLSTGVTTSSSLGERNVT 260
                         ::|..|...|   ||                                     
Zfish   159 -------------LASGVPFFWW---SD------------------------------------- 170

  Fly   261 VYKLYHSALALRDRQFRNATFLIYS--VLIKLIPCFALTILSVRLIGALLEAKRRRKILACHAAN 323
            ::::.|....|       .|.||::  .:|..:||....:|:..:|   |..::|::...|...:
Zfish   171 MWRVSHEPNNL-------DTALIWTHVTIIYFLPCCIFLVLNSLII---LRLRKRQRQQMCQDES 225

  Fly   324 DMQPIVNGKVVIPTQPKSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLLGDAFFL 388
            ..|..|..|:                  .:||.|||||..:|.|...|:     ..|:|...:..
Zfish   226 GQQLAVPSKL------------------GKTTAMLLAVTSVFAVLWAPR-----TGVVLYHLYVT 267

  Fly   389 QCY----LKLS-DLMDILALINSSINFILYCSMSRQFRSTF--ALLFRPRWLDKWLPL 439
            ..:    :.|: ||.::||::|:::||.|||.:|:.||:..  .||||...|....||
Zfish   268 SVHNDWRVHLAYDLANMLAMLNTAVNFFLYCFVSKPFRAAVRDVLLFRGAPLHPRRPL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsR2NP_001261323.1 7tmA_FMRFamide_R-like 24..424 CDD:410630 85/429 (20%)
TM helix 1 25..51 CDD:410630 7/22 (32%)
TM helix 2 57..82 CDD:410630 2/24 (8%)
TM helix 3 103..133 CDD:410630 14/56 (25%)
TM helix 4 145..165 CDD:410630 1/19 (5%)
TM helix 5 263..302 CDD:410630 9/40 (23%)
TM helix 6 349..379 CDD:410630 10/29 (34%)
TM helix 7 392..417 CDD:410630 11/25 (44%)
gpr142XP_001340684.3 None

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