DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-g2 and RGN

DIOPT Version :9

Sequence 1:NP_647710.1 Gene:yellow-g2 / 38295 FlyBaseID:FBgn0035328 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_004674.1 Gene:RGN / 9104 HGNCID:9989 Length:299 Species:Homo sapiens


Alignment Length:142 Identity:32/142 - (22%)
Similarity:49/142 - (34%) Gaps:49/142 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 DLVVDQNEVLWVLDTGI---VNTLETPVRKCPPKVVAMSVKTGKVLKTVSLEGLTSSNSRLQYLV 192
            |.|...|.:.|.||..|   :::|...|     ......::||::           ||.|..|.:
Human   148 DQVDISNGLDWSLDHKIFYYIDSLSYSV-----DAFDYDLQTGQI-----------SNRRSVYKL 196

  Fly   193 --VDYAPDGGCFVYVSDAANRA-IIVYNLQADRGFRVV--------------LPKAVTAGC---- 236
              .:..|||.|.    ||..:. :..||     |.||:              ||...|..|    
Human   197 EKEEQIPDGMCI----DAEGKLWVACYN-----GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGG 252

  Fly   237 RSRDVLYIALIR 248
            ::...:|:...|
Human   253 KNYSEMYVTCAR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-g2NP_647710.1 MRJP 127..381 CDD:281074 32/142 (23%)
RGNNP_004674.1 SGL 16..264 CDD:400653 31/140 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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