DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-g2 and yellow-d2

DIOPT Version :9

Sequence 1:NP_647710.1 Gene:yellow-g2 / 38295 FlyBaseID:FBgn0035328 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster


Alignment Length:439 Identity:93/439 - (21%)
Similarity:175/439 - (39%) Gaps:105/439 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LILGFCLVGW----ARSQGTKYGLWTPDRAHSDSQPIQWTGGQFEFPCASTKSLFKSSGKFIPKN 67
            ::.|.|...|    |::..:.:|.:..               :.|||....:......|.:.|.:
  Fly     5 IVFGVCCWCWLAASAQALESVFGAYNL---------------ELEFPSPQERQRALRDGLYDPGS 54

  Fly    68 VIATRAQLI---GD---TIYLALPRYRKGVPATL--VKTSIKPGTCSTTFKPYPC--WDLQEEGN 122
            ||.....:.   ||   :|::.:||:.||||.:|  |...::|.  .|..:.||.  |......:
  Fly    55 VIPIDVDVYYKHGDATPSIFVTIPRFAKGVPYSLAYVTNEMRPN--GTLLQAYPSYEWHKSHGAD 117

  Fly   123 CKALQSVVDLVVDQNEVLWVLDTGIVNTLETPVRKCPPKVVAMSVKTGKVL------KTVSLEGL 181
            |..|.||....:|:...:|:||:|.::.    ::.|||::.|:.:::|||.      |.:..||:
  Fly   118 CNGLTSVYRTQIDECGRMWILDSGEIDF----IQHCPPQLYAIDLESGKVAHQYKMPKRLYKEGV 178

  Fly   182 TSSNSRLQYLVVDYAP---DGGCFVYVSDAANRAIIVYNLQADRGFRV----VLPK----AVTAG 235
                ||.....|:..|   |.| |||::|:....|:||::.|.:.:|:    ..|.    ..|..
  Fly   179 ----SRFVTPTVELDPHNCDVG-FVYMADSIGDGIVVYDVAAQQSWRIENKFTYPHPDFGTFTIA 238

  Fly   236 CRSRDV----LYIALIRRDCGSTE-LYFTYLSTNKLFSLKSEYLRSGVADGRILD---------- 285
            ..|..:    :...|.....|... :||..||:....::..:.:.:| ::.|:.|          
  Fly   239 GESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNG-SNWRLNDVSAALDQFQL 302

  Fly   286 LGKKPSRMVIIGTDNGSAIFFRNEGDAEVYRWDTNSTFVEANFKPVYRSQTCQLVTHAVPDYKR- 349
            |||:.|:.|.........:.......|.:..|         |.:..|..|...::   |.|.:| 
  Fly   303 LGKRGSQCVAAAMSESGFLICGLVQPASLLAW---------NIRTGYSHQNLVML---VEDEQRL 355

  Fly   350 ---NTMRVLQSN--------FPDYMQNRVGCG--------AIQQLGLMQ 379
               :.:::::::        ..:.:|...|.|        .||:.|:.:
  Fly   356 QFASGLKIVRNHEGKEELWVLSNRLQKAFGAGLDYKEINFRIQKCGVQE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-g2NP_647710.1 MRJP 127..381 CDD:281074 63/305 (21%)
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 63/305 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.