DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13806 and Gasp

DIOPT Version :10

Sequence 1:NP_647708.1 Gene:CG13806 / 38292 FlyBaseID:FBgn0035325 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:216 Identity:53/216 - (24%)
Similarity:77/216 - (35%) Gaps:62/216 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 EGNFQCTSQ-GIFPDPYDCQKYHMCYFVGATLVAAAVDCGNDKAFDATTGQCTLTLTDSVCLQRQ 162
            :.:|:|... |.:|....|.||..|    ...|:....|||..|||||..:   .||::......
  Fly    18 QSSFKCPDDFGFYPHDTSCDKYWKC----DNGVSELKTCGNGLAFDATDSK---YLTENCDYLHN 75

  Fly   163 YYCPNAGHVAAWPTNP---------------NIFYVCKSTVNQNLNDTIVIYPSLHRCNDGETFV 212
            ..|.:...:....|.|               ::|:.|.:.           .||.::|:.|..: 
  Fly    76 VDCGDRTELEPPITTPHCSRLYGIFPDENKCDVFWNCWNG-----------EPSRYQCSPGLAY- 128

  Fly   213 D---YVCRSGSNVLPPSTDDPSVIIEDPNDDDFSVLPNTCQHVGLMADG---------NDCRKYY 265
            |   .||.....|  |...:..|.      :.||     |...|.:|:.         .||||||
  Fly   129 DRDARVCMWADQV--PECKNEEVA------NGFS-----CPAAGELANAGSFSRHAHPEDCRKYY 180

  Fly   266 YCSALNGTLRHMDCPNGTYYR 286
            .|  |.|..|...||.||.::
  Fly   181 IC--LEGVAREYGCPIGTVFK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13806NP_647708.1 CBM_14 105..158 CDD:426342 17/53 (32%)
ChtBD2 247..293 CDD:214696 17/49 (35%)
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 19/57 (33%)
CBM_14 97..144 CDD:426342 11/60 (18%)
CBM_14 170..218 CDD:426342 14/32 (44%)

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