DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13806 and cbd-1

DIOPT Version :10

Sequence 1:NP_647708.1 Gene:CG13806 / 38292 FlyBaseID:FBgn0035325 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:333 Identity:77/333 - (23%)
Similarity:111/333 - (33%) Gaps:94/333 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GATVTTRRIQPRETNSCE---------------GRQSPGPICESCELLATCVRHSNGWVNIPVES 70
            |...|:.|...|..|..|               |.::|...|....|  .|....|      ||.
 Worm  1002 GDETTSTRSYDRADNDSEDEEEDDVEHDQKCTVGSRTPVGFCVRTYL--ECTDAGN------VEK 1058

  Fly    71 -CDV-----ANGYYCNARLGSCTNET-------------GPCHPFGIEGNFQCT---SQGIFPDP 113
             |.:     ::...|..|:| |..|.             .|..|...||  :|.   .:.:|...
 Worm  1059 LCRIGKLFDSHSNRCVPRIG-CGKEAIRDAIKDMIATTPAPAQPKQFEG--RCAHVDGEAVFSIG 1120

  Fly   114 YDCQKYHMCYFVGATLVAAAVDCGNDKAFDATTGQCTLTLTDSVCLQRQYYCPNAGHVAAWPTNP 178
            ....||..|.: ||:.:.   .|..|:.|.....:|.:..:.|.|              ..|.||
 Worm  1121 VCSSKYLRCSY-GASKLQ---QCSEDRVFSNDKLECIVRESVSAC--------------TVPKNP 1167

  Fly   179 NI--FYV-------C---KSTVNQNLNDTIVIYPSLHRCNDGETFVDYVCRS--GSNVLPPSTDD 229
            :|  :|.       |   :..:.:|..|...|.    :|..||.|....|:|  ..|.|....|.
 Worm  1168 SIKKYYTSNDQSAFCDGKEDGLYRNERDCSAIL----QCFGGELFEHPSCQSSLAFNQLTGKCDY 1228

  Fly   230 PSVIIEDPNDDDFSVLPNTC-QHVGLMADGNDCRKYYYCSALNGTLRHMDCPNGTYYRPELSSC- 292
            |..:....|....:   ..| :|...:||.|:|..:|.|  :.|....|.||:||.:.|.||.| 
 Worm  1229 PQKVSGCENHGQTN---GECSEHGSFIADANNCEVFYRC--VWGRKVVMTCPSGTVFNPLLSVCD 1288

  Fly   293 ---VLGSC 297
               .:.||
 Worm  1289 WPSAVPSC 1296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13806NP_647708.1 CBM_14 105..158 CDD:426342 11/55 (20%)
ChtBD2 247..293 CDD:214696 18/50 (36%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696
ChtBD2 191..237 CDD:214696
CBM_14 692..743 CDD:426342
CBM_14 785..836 CDD:426342
CBM_14 1108..1161 CDD:426342 12/56 (21%)
CBM_14 1182..1235 CDD:426342 14/56 (25%)
CBM_14 1251..1296 CDD:426342 16/46 (35%)
Blue background indicates that the domain is not in the aligned region.

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