DRSC/TRiP Functional Genomics Resources

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Protein Alignment ecd and sgt1

DIOPT Version :9

Sequence 1:NP_647707.1 Gene:ecd / 38291 FlyBaseID:FBgn0000543 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_593497.1 Gene:sgt1 / 2543266 PomBaseID:SPAC1002.10c Length:590 Species:Schizosaccharomyces pombe


Alignment Length:665 Identity:161/665 - (24%)
Similarity:276/665 - (41%) Gaps:141/665 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RNE--ISAIVREKSLERS------YLWHKDEFQLQVRLGGAEERLLNEETNPEEEAELGDLPPHF 100
            :||  |.....||..|.:      :|...:..||:.   |.|....|||.|.:.....|  ....
pombe    19 QNECRIDVYFSEKEKESTEASINMFLAELERLQLEY---GKEHIWQNEELNLQRVEYQG--KDCI 78

  Fly   101 HGVTHYGDNISDEWFVVYLLTEITRARGDCIARVSDSDGEFLLIEAADALPDWASPETCEQRVYL 165
            .|:|::||.|.|||::|:||.|.::|......|:.|.||||||||||.:||.|...:..:.||::
pombe    79 LGITNFGDCIDDEWYIVWLLREASKAVKSAFVRIIDEDGEFLLIEAALSLPKWIDEDNSDYRVWI 143

  Fly   166 VGGHLQLLQNSAASSQDK---------PLTMAMAVQRIRMNPTLYRCSQEIQSCIDARLKEYQIA 221
            ..|.:.:|:     .:|:         |||...|:.:|.....|| .|:|:...|..|||::..|
pombe   144 HNGEVIILR-----PEDEFLKKMNRCPPLTREQAIFQISSGSNLY-TSREVNDSISQRLKKFPKA 202

  Fly   222 QPHFSIH-RQVLELPHSAAQLLKQKPRLLSSAVRAFCERDSLDIKALRTMRYFPPEATRVRTNVR 285
            .   ::. |.:..:|.....:|::...|:||||.||..||.:|......|..| .:...|.|.:.
pombe   203 A---NVKLRAICTVPRKIVHVLQKNKNLISSAVNAFYYRDPIDENYCDRMSKF-NQNDLVTTTIT 263

  Fly   286 FTRCLYAMLSHQQ---YLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEILATQAKRVEGQ-- 345
            ||..|||.|..|:   :.|     :||...|...: |:..:||:||:.|.|||....:.||.:  
pombe   264 FTPLLYAQLYQQRCKTFRP-----FHLPSDVHSLD-YERAILGMKLSCGFEILYNSKENVEKRTE 322

  Fly   346 -----QLEDLPAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRGNQERFRTASRAGAEIL 405
                 |::.||......:..|        ||....:..:          |.:          |:.
pombe   323 IDEYLQIQPLPTDEDIKKIPL--------IEDDTSFMNV----------NPD----------ELE 359

  Fly   406 DLLLHPAEAASEELRDEE-NNLQPSDSDEWLNISAEDLDSMLQDRYGPKKL--------YKPN-G 460
            :||.....:..::..|:| :....:|.|..| :..|:   |:...:|.|.:        .|.| .
pombe   360 ELLEKKLNSFCDDFGDDERSGFDNTDHDNTL-VGEEE---MVPGNHGGKSINEEITKNKQKQNFN 420

  Fly   461 QMNAEEFTKQLAEFL-DRQSNYEGIEHRGLEEPELDSDDDEPPPQANGSTGLTAKVKKNPSMRKA 524
            :.:.:....::..|: |..||....:..|::..:.|:|.|.   .|:....:            .
pombe   421 ESDLKNMASRIETFINDEASNNHREDFYGVKNSDTDTDSDS---LADSDDEI------------F 470

  Fly   525 CQRNSVIQPEEPDSTHVRNFLDFVIPEDNWDSTSEMSDYA--DEDDMESNLNALSGGGSVFPLDR 587
            ..||..|...|.|.|   .|.|.:..:|......::.:::  :||:|:            .|.|.
pombe   471 LNRNQGIDEVEFDET---KFYDLLKGKDGKYQNQDVDEFSSGNEDEMD------------IPGDA 520

  Fly   588 QIQSYMEQMDRELAQTSVGKSFHGKKKTAPQADEDDFDDIEDFEPININVNTLRNMMDSYQSQVG 652
            .::.||..||.||.....|:.                :.:|..:..:|::|.::|:::..::...
pombe   521 NMEEYMRAMDEELYGGLRGRD----------------EGLEGIDDKDIDLNLMKNIIEGIEANPD 569

  Fly   653 -GAGPVSNLFSAMGV 666
             ..||:|.|.:::.:
pombe   570 LYGGPISTLLNSLKI 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecdNP_647707.1 SGT1 18..619 CDD:284501 153/615 (25%)
sgt1NP_593497.1 SGT1 29..533 CDD:284501 147/586 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2406
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 130 1.000 Inparanoid score I1428
OMA 1 1.010 - - QHG55284
OrthoFinder 1 1.000 - - FOG0005816
OrthoInspector 1 1.000 - - oto101186
orthoMCL 1 0.900 - - OOG6_103730
Panther 1 1.100 - - LDO PTHR13060
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1332
SonicParanoid 1 1.000 - - X4794
TreeFam 1 0.960 - -
1211.860

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