DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ecd and ecd

DIOPT Version :10

Sequence 1:NP_647707.1 Gene:ecd / 38291 FlyBaseID:FBgn0000543 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_061508256.1 Gene:ecd / 1276481 VectorBaseID:AGAMI1_005084 Length:721 Species:Anopheles gambiae


Alignment Length:726 Identity:298/726 - (41%)
Similarity:420/726 - (57%) Gaps:94/726 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LEFVREEDFVEYYIFPKIPDNVQD------EGALRKLMLQIRNEISAIVREKSLERSYLWHKDEF 67
            |:.:||:|||||::||..|.:..|      |.||..|:.::.....|..:.      |:||:|.|
Mosquito     7 LQSIREDDFVEYFLFPARPSDPSDVELENNEHALEPLLQEVNRLAEAFCQR------YIWHRDGF 65

  Fly    68 QLQVRLGGAEERLLNEETNPEEEAELGDLPPHFHGVTHYGDNISDEWFVVYLLTEITRARGDCIA 132
            ::..||.. :.|:|.|....:.......||.|.:|::|.||||.||||:|.||..:|......:|
Mosquito    66 RVVPRLLN-DTRMLIEAAEGQNGTANAKLPSHLYGISHVGDNIQDEWFIVALLFHLTERIPGLVA 129

  Fly   133 RVSDSDGEFLLIEAADALPDWASPETCEQRVYLVGGHLQLLQNSAASSQDKPLTMAMAVQRIR-M 196
            ||.|:||||||||||:.||.||:||:||.:|::..|.|:|:| .....|.:.|.:..|::|:| .
Mosquito   130 RVVDADGEFLLIEAAEQLPRWANPESCEGKVFICNGTLRLVQ-PREEGQQESLEIQDALERVRGT 193

  Fly   197 NPTLYRCSQEIQSCIDARLKEY--QIAQPHFSIHRQVLELPHSAAQLLKQKPRLLSSAVRAFCER 259
            ....|..|.|:..||..|::.:  .|.:.|   ||..:.:|...|.:|::.|:|::.||.|||.|
Mosquito   194 EGAKYCVSAEVDQCIRERIQGFPEDIVEHH---HRATVSVPVGVAAVLRENPQLVAPAVLAFCGR 255

  Fly   260 DSLDIKALRTMRYFPPEATRVRTNVRFTRCLYAMLSHQQYLPEKRLGWHLTDPVSEPERYKEQLL 324
            |.:|:||.|.||||||| ..|..:|.||:||||||:..:|||::|.||  |.|:|....||..:|
Mosquito   256 DPIDLKACRAMRYFPPE-NCVNVSVTFTKCLYAMLAQSRYLPDRRTGW--TIPLSTDPAYKAHML 317

  Fly   325 GLKLASGLEILATQAKRVEGQQLEDLPAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRG 389
            |:|||.|.||||:|||......:.| ..|:||..||.:|||||||||||.|:.:||..|:.|:..
Mosquito   318 GVKLACGFEILASQAKTSRTDWVTD-KGWKSYYESLKAKGYFRDNIEGSQEHTKLLAIAREYYAE 381

  Fly   390 NQERFRTASRAGAEILDLLLHPAEAASEELRDEENNLQPSDSDEWLNISAEDLDSMLQDRYGPKK 454
            |::..||..:.|.||:.:|.. .|...||||.|...|.|:|||:|:|||.|:||.:|..|||.||
Mosquito   382 NRDSMRTTPKIGEEIVSILKR-NEWDVEELRRESAELPPADSDDWMNISPEELDQLLTKRYGAKK 445

  Fly   455 LYKPNG---QMNAEEFTKQLAEFLDRQSNYEGIEHRGLEEPELDSDDDEPPPQANGSTGLTAKVK 516
            |:..||   ...||.||..:::|||::|.::|:.          .:||:...||  :..:.||:.
Mosquito   446 LFSLNGNNANAAAETFTSMVSDFLDQKSEFDGVV----------VEDDKDAEQA--AKAVLAKLD 498

  Fly   517 ----KNPSM-----------RKACQRNSVIQPEEPDS----------------------THVRNF 544
                |:|:.           |:..|:||......||:                      .||||.
Mosquito   499 LGPLKSPTKPKRTKSKGAHDRQKGQQNSKSATSVPDAGSTIPQESPFHQSVDFDAGAFGMHVRNM 563

  Fly   545 LDFVIPEDNWDST--SEMSDYADEDDMESNLNALSGGGSVFPLDRQIQSYMEQMDRELAQTSVGK 607
            ||.:||||.|||:  ||||||: :|:.:.|:..:|...:...:..::|:||.|||||||.|::||
Mosquito   564 LDLLIPEDRWDSSDESEMSDYS-QDEYDRNIEDMSPTRTNRAVQSELQTYMAQMDRELAGTTIGK 627

  Fly   608 SFH--------------GKKKTAPQADEDDFDDIEDFEPININVNTLRNMMDSYQSQVGGAGPVS 658
            ||.              |.|.:||.|..|||||||.|:|:||:||||||||:|||||:||.||.:
Mosquito   628 SFETAIDDGEEGGDEGDGGKSSAPTAAGDDFDDIETFKPVNIDVNTLRNMMESYQSQLGGPGPAA 692

  Fly   659 NLFSAMGVGMS 669
            ||..:|||.:|
Mosquito   693 NLLGSMGVQIS 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecdNP_647707.1 SGT1 18..617 CDD:462089 256/663 (39%)
ecdXP_061508256.1 None

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