DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ecd and ECD

DIOPT Version :9

Sequence 1:NP_647707.1 Gene:ecd / 38291 FlyBaseID:FBgn0000543 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001129224.1 Gene:ECD / 11319 HGNCID:17029 Length:677 Species:Homo sapiens


Alignment Length:728 Identity:233/728 - (32%)
Similarity:351/728 - (48%) Gaps:154/728 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EDFVEYYIFPKIPDNVQDEGALRKLMLQIRNEISAIVREKSLERSYLWHKDEFQLQVRLGGAEER 79
            ||.|||.:| .|||..:|....::::.:....|  |.|...:...|:|....|.|:.:.|     
Human    11 EDTVEYCLF-LIPDESRDSDKHKEILQKYIERI--ITRFAPMLVPYIWQNQPFNLKYKPG----- 67

  Fly    80 LLNEETNPEEEAELGDLPPHFHGVTHYGDNISDEWFVVYLLTEITRARGDCIARVSDSDGEFLLI 144
                         .|.:|.|..|||.:||||.||||:||::.:||:...:.:||:.|:|||||||
Human    68 -------------KGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLI 119

  Fly   145 EAADALPDWASPETCEQRVYLVGGHLQLL---QNSAASS--QDKPLTMAMAVQRIRMNPTLYRCS 204
            ||||.||.|..||....||:...|.|.::   :.|.|.|  ...|.|:..|:..|..:......|
Human   120 EAADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEKILAS 184

  Fly   205 QEIQSCIDARLKEYQIAQPHFSIHRQVLELPHSAAQLLKQKPRLLSSAVRAFCERDSLDIKALRT 269
            :.|::.::.|::.|. .:...|:||....||.....:|||:|||:::||:||..||.:|::|.|.
Human   185 ESIRAAVNRRIRGYP-EKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDPIDLRACRV 248

  Fly   270 MRYFPPEATRVRTNVRFTRCLYAMLSHQQYLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEI 334
            .:.|.|| ||:.|:|.||:||||.|..|:::|::|.|:.|..| |:|: |:...||:|||.|.||
Human   249 FKTFLPE-TRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPP-SDPQ-YRAHELGMKLAHGFEI 310

  Fly   335 LATQAKRVEGQQLEDL----PAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRGN---QE 392
            |.::.........:.|    |.|.|:|.||....||:..|||||:|:|.|..|:.||:.:   .|
Human   311 LCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERLEMAENYFQLSVDWPE 375

  Fly   393 RFRT--------------------------------ASRAGAEILDLL-LHPAEAASEELRDEEN 424
            |...                                |...|.|||.|| ..|.:.  |:|:.|..
Human   376 RLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTLLQTIPFDI--EDLKKEAA 438

  Fly   425 NLQPSDSDEWLNISAEDLDSMLQDRYGPKK---LYKPNGQMNAE--EFTKQLAEFLDRQSNYEGI 484
            ||.|.|.|:||::|.:.||.:||:..|.|:   :.|...:.|.:  |.::.:..|:.:.|.    
Human   439 NLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVST---- 499

  Fly   485 EHRGLEEPELDSDDDEPPPQANGSTGLTAKVKKNPSMRKACQRNSVIQPEEP---DSTHVRNFLD 546
             |:|.|.|                        :.||             |.|   |:....|:.|
Human   500 -HKGAELP------------------------REPS-------------EAPITFDADSFLNYFD 526

  Fly   547 FVI-PEDNWDSTSEMSDYADED----DMESNLN----------ALSGGGSVFPLDRQIQSYMEQM 596
            .:: |..|   .|:..|..|||    |.:.:|:          :|.|     .|| .::|||.||
Human   527 KILGPRPN---ESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKG-----TLD-NLKSYMAQM 582

  Fly   597 DRELAQTSVGKSFHGKKKTAP-------QADEDDFDDIED-FEPININVNTLRNMMDSYQSQVGG 653
            |:|||.|.:.|||..:.:..|       .:||:|....|. ..|:::::|.:.|:::||.||.|.
Human   583 DQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGL 647

  Fly   654 AGPVSNLFSAMGV 666
            |||.|||..:|||
Human   648 AGPASNLLQSMGV 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecdNP_647707.1 SGT1 18..619 CDD:284501 210/675 (31%)
ECDNP_001129224.1 SGT1 14..630 CDD:284501 215/693 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159883
Domainoid 1 1.000 279 1.000 Domainoid score I1706
eggNOG 1 0.900 - - E1_KOG2406
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5256
Inparanoid 1 1.050 314 1.000 Inparanoid score I2568
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55284
OrthoDB 1 1.010 - - D359582at33208
OrthoFinder 1 1.000 - - FOG0005816
OrthoInspector 1 1.000 - - oto89846
orthoMCL 1 0.900 - - OOG6_103730
Panther 1 1.100 - - LDO PTHR13060
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1332
SonicParanoid 1 1.000 - - X4794
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.