DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ecd and ecd

DIOPT Version :9

Sequence 1:NP_647707.1 Gene:ecd / 38291 FlyBaseID:FBgn0000543 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_956185.1 Gene:ecd / 100003562 ZFINID:ZDB-GENE-030131-6304 Length:630 Species:Danio rerio


Alignment Length:687 Identity:217/687 - (31%)
Similarity:349/687 - (50%) Gaps:111/687 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EDFVEYYIFPKIPDNVQDEGALRKLMLQIRNEISAIVREKSLERSYLWHKDEFQLQVRLGGAEER 79
            ||.|:|.:|....|....|.:|::::..|..||:.::      ..|:|....|.|....|     
Zfish    11 EDAVQYKLFVVAADPSAPEKSLQQILQDILAEITPLL------VPYIWQHQPFNLTQHPG----- 64

  Fly    80 LLNEETNPEEEAELGDLPPHFHGVTHYGDNISDEWFVVYLLTEITRARGDCIARVSDSDGEFLLI 144
                         .||:|.|..|||.:|||:.||||:||||..||....|....|.|:||:||||
Zfish    65 -------------KGDVPAHLGGVTEFGDNVEDEWFIVYLLKHITHTFTDIAGVVYDNDGQFLLI 116

  Fly   145 EAADALPDWASPETCEQRVYLVGGHLQLLQNSAAS-----SQDKPLTMAMAVQRIRMNPTLYRCS 204
            |||:.||.|..|::.|.||:|..|.|.::..|::|     |:|...|:..|::.:|::.......
Zfish   117 EAAEHLPKWLDPDSSENRVFLYHGELHIIPMSSSSGEVGFSRDCVPTVRQALEVLRLHTDRCLAK 181

  Fly   205 QEIQSCIDARLKEY--QIAQPHFSIHRQVLELPHSAAQLLKQKPRLLSSAVRAFCERDSLDIKAL 267
            |.|:|.::.|:..|  :|.|   ::||....:|...|.:|.::|.|::.||.||..||.:|::|.
Zfish   182 QTIRSALNQRIHGYPDKIQQ---NVHRAHCYVPAGIAVVLSRRPDLIAPAVSAFYLRDPVDLQAC 243

  Fly   268 RTMRYFPPEATRVRTNVRFTRCLYAMLSHQQYLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGL 332
            ||...|||: |||.|:|:|||||||.|..|.::|::|.|:.|  |.....:|:...||:|||.|.
Zfish   244 RTFHTFPPD-TRVMTSVKFTRCLYAQLQQQSFVPDRRSGFSL--PARSHPQYRAHELGMKLAHGF 305

  Fly   333 EILATQAKRVEGQQ---LEDLPAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRGNQERF 394
            |||.::.......|   :...|.||.:|.||...|||:.|:||||.|:||:..|:.:||.:..|.
Zfish   306 EILCSKNGESSSDQEPSVSSNPLWRGFLESLKKNGYFKGNLEGSARYKELMTSAESFFRQSVTRT 370

  Fly   395 RTAS--RAGAEILDLLLHPAEAASEELRDEENNLQPSDSDEWLNISAEDLDSMLQDRYG----PK 453
            ....  ..|.|:|. :|..|..:.|:|:.:|.||.|.|||.||:||.::|:.:|.:|.|    .:
Zfish   371 HRPDIHNPGGEVLK-VLQSASYSLEDLQKQEANLPPEDSDAWLDISPQELERLLAERGGRGGTGE 434

  Fly   454 KLYKPNGQMNAEEFTKQLAEFLDRQSNYEGIEHRGLEEPELDSDDDEPPPQANGSTGLTAKVKKN 518
            ::.:.....:....|:.:..|::..|::||.|                                 
Zfish   435 EVQEEESGYSLIAVTQGMKNFINAMSSHEGAE--------------------------------- 466

  Fly   519 PSMRKACQRNSVIQPEEPDSTHVRNFLDFVI--PEDNWDSTSEMSDYADEDD---------MESN 572
                  ..|:.:.:|...|...|.:.||.::  .:|..||    .|:.||||         ::|:
Zfish   467 ------IPRSCLAEPFRFDPDSVTSALDRLLGAKDDELDS----DDFEDEDDDDDDDDDEAVQSS 521

  Fly   573 LNALSGGGSVFPLDRQIQSYMEQMDRELAQTSVGKSFHGKKKTAPQADEDDFDD-------IED- 629
            :......|:. .|| .::.||::||:||..|::||||....:::.:|:......       :|| 
Zfish   522 VPQEQATGAE-TLD-NLRKYMDEMDQELQSTNIGKSFTQNNRSSNKAEASKSSSSTSASELLEDE 584

  Fly   630 FEPININVNTLRNMMDSYQSQVGGAGPVSNLFSAMGV 666
            .:|:::::|.:.|:::|..||.|.|||.|||..::|:
Zfish   585 IQPLDVDLNLVTNLLESLSSQAGLAGPASNLLQSLGL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecdNP_647707.1 SGT1 18..619 CDD:284501 198/627 (32%)
ecdNP_956185.1 SGT1 14..591 CDD:284501 189/603 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596144
Domainoid 1 1.000 282 1.000 Domainoid score I1625
eggNOG 1 0.900 - - E1_KOG2406
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5256
Inparanoid 1 1.050 312 1.000 Inparanoid score I2572
OMA 1 1.010 - - QHG55284
OrthoDB 1 1.010 - - D359582at33208
OrthoFinder 1 1.000 - - FOG0005816
OrthoInspector 1 1.000 - - oto39612
orthoMCL 1 0.900 - - OOG6_103730
Panther 1 1.100 - - LDO PTHR13060
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4794
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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