DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13807 and ramac

DIOPT Version :10

Sequence 1:NP_647706.1 Gene:CG13807 / 38290 FlyBaseID:FBgn0035323 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001037960.1 Gene:ramac / 733725 XenbaseID:XB-GENE-969014 Length:116 Species:Xenopus tropicalis


Alignment Length:116 Identity:35/116 - (30%)
Similarity:45/116 - (38%) Gaps:24/116 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ESCELEFADRFTDDDPEFMAHCSKPVPEPPIVENWMGGGGGGGGFQGGGGGGHPYHNRY--NGHR 82
            |..|..|..|||.:|.|:..:..:...:|||||:|.             .|.....:||  |.|.
 Frog     9 ELYEKMFEQRFTANDKEYQEYLKREQDQPPIVEDWK-------------MGNQRNTDRYRDNRHH 60

  Fly    83 RG-GGDRGWQR--------RGGAGYHNNQDRGFRDNRRNNRYDHIDRRNRY 124
            || .|.:.|..        |||.|...||.|..|.|.:...|.|.....|:
 Frog    61 RGWDGRQNWSSNSYNQSYGRGGWGNSYNQYRQDRHNYQQGHYTHNPSNQRF 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13807NP_647706.1 RAM 21..106 CDD:464643 29/95 (31%)
ramacNP_001037960.1 Interaction with RNMT. /evidence=ECO:0000250|UniProtKB:Q9BTL3 1..55 16/58 (28%)
RAM 11..83 CDD:464643 24/84 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..116 27/94 (29%)
RNMT-activating domain. /evidence=ECO:0000250|UniProtKB:Q9BTL3 36..42 4/5 (80%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:Q9BTL3 56..116 18/56 (32%)

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