DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13807 and Ramac

DIOPT Version :9

Sequence 1:NP_647706.1 Gene:CG13807 / 38290 FlyBaseID:FBgn0035323 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_080273.1 Gene:Ramac / 67148 MGIID:1914398 Length:119 Species:Mus musculus


Alignment Length:160 Identity:48/160 - (30%)
Similarity:59/160 - (36%) Gaps:62/160 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NFLESCELEFADRFTDDDPEFMAHCSKPVPEPPIVENWMGGGGGGGGFQGGGGGGHPYHNRYNGH 81
            ||.|.    ||.|||.||.|:..:..:|...|||||.|....||                  |..
Mouse    10 NFEEM----FASRFTKDDKEYQEYLKRPPESPPIVEEWNSRAGG------------------NQR 52

  Fly    82 RRGGGDRGWQRRGGAGYHNNQDRGFRDNRRNNRYDHIDRRNRYEGGGGSGGSGGYKR-------- 138
            .||    .|.:      .|.|.|| |||||....|  :|.|::.  |.|.|:..|.:        
Mouse    53 NRG----NWLQ------DNRQFRG-RDNRRGWPSD--NRSNQWH--GRSWGNNNYPQQRPEPYYQ 102

  Fly   139 ----SHDHNQRNDTPNNEPPMKVRRDYGNF 164
                .:.||||       ||      ||.:
Mouse   103 QQYTQYGHNQR-------PP------YGYY 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13807NP_647706.1 RAM 21..106 CDD:291966 24/84 (29%)
RamacNP_080273.1 Interaction with RNMT. /evidence=ECO:0000250|UniProtKB:Q9BTL3 1..55 21/66 (32%)
RAM 10..87 CDD:291966 37/113 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..119 37/134 (28%)
RNMT-activating domain. /evidence=ECO:0000250|UniProtKB:Q9BTL3 36..42 4/5 (80%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:Q9BTL3 56..119 25/86 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR48168
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
22.060

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