DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oxt and wscd1

DIOPT Version :10

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_001072375.1 Gene:wscd1 / 779828 XenbaseID:XB-GENE-5802595 Length:573 Species:Xenopus tropicalis


Alignment Length:752 Identity:133/752 - (17%)
Similarity:218/752 - (28%) Gaps:275/752 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RWLKR--YRAFFLILLLIVAIQLFLAYKS-LDIVGGGSGSGFDAAEAPASPPPPHAQARVQPPAR 69
            ::|:|  :..|||.:..::|..|.|..:| |.|.....|:..:...:..|....:...|:.|...
 Frog    10 KFLRRAQFFLFFLTVAYLMAGSLLLLQRSYLVIQQSNRGTVGNLGLSADSVGDQYIDHRMVPKGL 74

  Fly    70 TKLTAQQL-----GF--QPECDILAREAISALQR------AKTKDCREHIAQIACAIQAGRFYAP 121
            .||.|:.|     |.  ||...|.....:..|:|      .|.:|                   |
 Frog    75 AKLHAKNLLTQRHGVIDQPLWLITRNSELRQLRRRWFHNFVKDQD-------------------P 120

  Fly   122 QLRSSCPAGNH---TANVSLGCFKDEKDRRLLAGYYSSSKTSNSPAKCVELCLQSGYPYAGVQYG 183
            .|.:......|   .....:|||.|..::|.|...........:.:.|.:.|.:..|.|||:.||
 Frog   121 SLGTPSKVVKHMLVNKGTYVGCFVDNAEKRTLKATVFFDLRKMTVSHCQDACAERTYVYAGLAYG 185

  Fly   184 RECFCGYDPPPKASKLPDSSCNTKCLGNAKEICGGFYAMNIYETGIAKFTAQLAATTPSEETKRV 248
            .||:||...|...:|  :..||.:|.|....:|||...::::.                      
 Frog   186 SECYCGNHLPLNRAK--EEECNNECKGEKGSVCGGVNRLSVFR---------------------- 226

  Fly   249 RIAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARKRFSTI 313
                        |..:|              :...:|::..||...........|          
 Frog   227 ------------LEDLH--------------VSAKQRRNVTYRGCFRAPENVTRI---------- 255

  Fly   314 WGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDFLSANPGRNFVKGHGRETQK 378
                                     |.::     ||..|::...:|.|                 
 Frog   256 -------------------------FPVS-----FPNLTVEMCSEFCS----------------- 273

  Fly   379 FIQKQGLDKTFVECDTHMWRIGDRKLPAGIQVDGGSDWVALSRPFVGYVTHPREDDELLQALLKL 443
                                  |::.|..|        |..:..|.||   |.....|.:.|   
 Frog   274 ----------------------DKEYPLAI--------VKWTECFCGY---PTGQFNLYEPL--- 302

  Fly   444 FRHTLLPAESFFHTVLRNTKHCTSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWP 508
                   .||.          |..|: |..:.:...|::.....|:..:....|:...|.|    
 Frog   303 -------DESL----------CAGYL-NGTNESEALREENYCSVYQTPIQDTRCTDRKFLP---- 345

  Fly   509 RLQATEQKSLFFARKFEPVINQAVLLQLEEWLYGPYTSEYANLHGYWQSLYHHEDVHGSGDD--L 571
                 .:..:|.|....|......:..|.|...|.||..|     |:....:::...|..|.  .
 Frog   346 -----IKSKVFIALSSFPGAGNTWVRHLIEHATGYYTGSY-----YFDGTLYNKGFKGEKDHWRS 400

  Fly   572 ARSIGDSVMRLSARQAKLYPLELIELTHYLHRDQYKGFLVRYRARGSTGKPLHLETRVRPTQQGK 636
            .|:|.........|:.::|...::     |.|:.||..:..:..:  .|..|...|         
 Frog   401 GRTICVKTHESGKREIEMYDSSIL-----LIRNPYKALIAEFNRK--CGGHLGYAT--------- 449

  Fly   637 LARNARFSKRLRNFEVSTDFDQKEQIARNFGKLLGPQSDLLLSYTLQANADSGAASHSYNLTLLW 701
                                 :|...:|.:.:.:.       ||.      |..|||:    |.|
 Frog   450 ---------------------EKHWTSREWPEFVN-------SYA------SWWASHA----LDW 476

  Fly   702 IDPLGRLQDFNELHVEDSTSDVINHSKTL---LKHPI 735
            :. .||  ....:|.||...|:|...:.:   ||.||
 Frog   477 LQ-YGR--KLLVVHYEDLKMDLIGKLREMLAFLKVPI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:460348 25/79 (32%)
Branch 250..504 CDD:452742 31/253 (12%)
Xylo_C 537..709 CDD:463618 31/173 (18%)
wscd1NP_001072375.1 WSC 138..228 CDD:214616 27/125 (22%)
WSC 241..331 CDD:214616 26/200 (13%)
Sulfotransfer_1 347..539 CDD:473908 44/226 (19%)

Return to query results.
Submit another query.