DRSC/TRiP Functional Genomics Resources

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Protein Alignment oxt and Gcnt1

DIOPT Version :10

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_071612.1 Gene:Gcnt1 / 64043 RGDID:621370 Length:428 Species:Rattus norvegicus


Alignment Length:314 Identity:80/314 - (25%)
Similarity:143/314 - (45%) Gaps:41/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 IAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLE-LESKFPNIRLARKRFSTI 313
            ||:.:.::.: :..:.|||:|:|.|::.|.||||.:.:..:...:: :.|.|.|:.:|.:..|.:
  Rat   123 IAYSIVVHHK-IDMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVV 186

  Fly   314 WGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDFLSANPGRNFVKGHGRETQK 378
            :...|.:...|.||:||.:.|.:|.::|||...|||:||..::|..|.:..|.|.:     ||:|
  Rat   187 YASWSRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKSFTGENSL-----ETEK 246

  Fly   379 F--IQKQGLDKTFVECDTHMWRIGDRKL--PAGIQVDGGSDWVALSRPFVGYVTHPREDDELLQA 439
            .  .:::...|.:...|..:...|..|.  |....:..||.:..::|.:||||.    :::.:|.
  Rat   247 MPPNKEERWKKRYTVVDGKLTNTGVVKAQPPLKTPLFSGSAYFVVTREYVGYVL----ENKNIQK 307

  Fly   440 LLKLFRHTLLPAESFFHTVLR----------NTKHCTSYVDNNLHVTNWKRKQG--------CKC 486
            .::..:.|..|.|..:.|:.|          :.|:..|.::.......|:..:|        ..|
  Rat   308 FMEWAQDTYSPDEFLWATIQRIPEVPGSLPSSHKYDLSDMNAVARFVKWQYFEGDVSNGAPYPPC 372

  Fly   487 QYKHVVDWCGCSPNDFKPEDWPRLQATEQKSLFFARKFEPVINQAVLLQLEEWL 540
            ...||...|.....|.   .|     ..:|..|||.||:..::...|..|||.|
  Rat   373 SGVHVRSVCVFGVGDL---SW-----MLRKHHFFANKFDMDVDPFALQCLEEHL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:460348
Branch 250..504 CDD:452742 68/276 (25%)
Xylo_C 537..709 CDD:463618 3/4 (75%)
Gcnt1NP_071612.1 Branch 123..391 CDD:426795 69/285 (24%)
Blue background indicates that the domain is not in the aligned region.

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