DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oxt and wscd1b

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:XP_005169248.1 Gene:wscd1b / 565449 ZFINID:ZDB-GENE-091118-93 Length:568 Species:Danio rerio


Alignment Length:567 Identity:111/567 - (19%)
Similarity:188/567 - (33%) Gaps:196/567 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FFLILLLIVAIQLFLAYKSLDIVGGGSGSGF----DAAEAPASPPPPHAQARVQPPARTKL---- 72
            |||.:..|:|..:.|..:|..:.       |    :....|:.|.||.|   ::.||...|    
Zfish    20 FFLGVAYIMAGSVLLLQRSSVVT-------FQRDTETVALPSLPAPPRA---LEGPAVRWLYRRN 74

  Fly    73 TAQQLGFQPECD--------ILAREAISALQR------AKTKDCREHIAQIACAIQAGRFYAPQL 123
            ..|::......|        |.....|..|:|      |:.|...||......|.|.|.:     
Zfish    75 IIQEIENLDHTDNRNDQKHLITPNLEIRHLRRHWFQSSAEQKSFSEHHLLQKEARQKGTY----- 134

  Fly   124 RSSCPAGNHTANVSLGCFKDEKDRRLLAG--YYSSSKTSNSPAKCVELCLQSGYPYAGVQYGREC 186
                          :|||.:.:....|.|  .|...|.:::  .|.:.|.:||:.|||:::|.||
Zfish   135 --------------IGCFINNETEHALGGTILYDFRKMTST--LCQDTCSESGFRYAGLEFGSEC 183

  Fly   187 FCGYDPPPKASKLPDSSCNTKCLGNAKEICGGFYAMNIYET-----GIAKF-------------- 232
            .||.....:.::..|  ||..|.|.....|||...|::|..     |..::              
Zfish   184 HCGNRVCARRARGED--CNLDCRGEKGSPCGGVGRMSVYRVEDRLPGQRRYRTVHYHGCYKRPKN 246

  Fly   233 -TAQLAATT--PSEETKRV----------------------RIAFLLTL----NGRALRQVHRLL 268
             ||.|...|  |:...::.                      |.:||||:    |.:..::.::..
Zfish   247 STADLLIHTSGPTHTPQQCIESCTDQDLPLALLRGQDCFCSRASFLLTIQMSENDQMCKKANQTN 311

  Fly   269 KALYAPEHVYYIH----VD---ERQDYLYRKLLELE--SKFPNIRLARKRFSTIWGGASLLTMLL 324
            :........|:::    :|   :.:.:|.:|...|.  |.||.            .|.:.|..|:
Zfish   312 QTSLHDLDFYWVYSTPVLDATCKERSFLAQKSSSLVALSSFPG------------AGNTWLRHLI 364

  Fly   325 QCMEDLLQSNWHWDFVIN----LSESDF-----------------PVKTLDKLVDFLSANPGRNF 368
            :.:......::::|..:.    ..|.|:                 .::..|..: .|..||.|:.
Zfish   365 ELVTGFYTGSYYFDGSLYNKGFKGEKDYWQSGRVVCVKTHESGQREIQMFDSAI-LLMRNPYRSL 428

  Fly   369 VKGHGRETQKFIQKQGLDKTFVECDTHM-------WRIGDRKLPAGIQVDGGSDWVALSRPFVGY 426
            :....|                :|..|:       ||..:    ....||..|.|         :
Zfish   429 MAEFNR----------------KCAGHLGYASHAHWRSKE----WSEFVDSYSSW---------W 464

  Fly   427 VTHPREDDELLQALLKL-FRHTLLPA--ESFFHTVLRNTKHCTSYVD 470
            |:|         ||..| |.|.||..  |.....|:...|..|::::
Zfish   465 VSH---------ALAWLRFAHRLLVVHFEDLQKDVVPQIKTVTAFLN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 25/81 (31%)
Branch 250..503 CDD:280621 46/265 (17%)
Xylo_C 537..710 CDD:289306
wscd1bXP_005169248.1 WSC 134..213 CDD:307780 25/101 (25%)
WSC 237..>286 CDD:321995 5/48 (10%)
Sulfotransfer_3 349..547 CDD:328790 36/205 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I10030
eggNOG 1 0.900 - - E1_KOG4157
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.900

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