DRSC/TRiP Functional Genomics Resources

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Protein Alignment oxt and gcnt4b.2

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:XP_005161276.1 Gene:gcnt4b.2 / 492587 ZFINID:ZDB-GENE-041111-161 Length:420 Species:Danio rerio


Alignment Length:418 Identity:100/418 - (23%)
Similarity:156/418 - (37%) Gaps:113/418 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 VQYGRECFCGYDPPP------------KASK-LPDSSCNTKCLGNAKEICGGFYAMNIYETGIAK 231
            |:||..|...|:..|            |..| |.|::     :.||...|..|.:...|.     
Zfish    49 VKYGINCTKIYEMEPVEVGKSLVIRKQKIYKGLTDAA-----IANATIDCEWFVSSQGYN----- 103

  Fly   232 FTAQLAATTPSEETKRVRIAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQ--DYLYRKLL 294
               .:..|   |..:...:|:.|.::..| ..|.|||:|:|.|.::|.||.|.:.  |::. .:.
Zfish   104 ---DIQVT---ESEREFPLAYSLVVHQDA-ALVERLLRAVYVPHNIYCIHYDRKSSTDFML-AMN 160

  Fly   295 ELESKFPNIRLARKRFSTIWGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDF 359
            .|....||:.:|.|.....:.|.|.|...|.|:.|||.|...|.:||||...|||::|..:||..
Zfish   161 GLARCIPNVFIASKLERVQYAGISRLRADLNCLSDLLDSEVKWKYVINLCGQDFPLRTNAELVSD 225

  Fly   360 LSANPGRNFVKGH---GRETQKFIQKQGLDKTFVECDTHMWRIGDRKL--------------PAG 407
            |....|||.|:..   |::.:..:.             |:.:..|.:.              |..
Zfish   226 LKGLKGRNMVESKWPGGKKIRWSVH-------------HLLKNNDSEYYDFPVSTPEEKPPPPHN 277

  Fly   408 IQVDGGSDWVALSRPFVGYVTHPREDDELLQALLKLFRHTLLPAESFFHTVLR---------NTK 463
            |::..||.:..|||.|| |..|   ...|.:..|.....|..|.|.|:.|::|         .:.
Zfish   278 IEMFVGSAYFTLSREFV-YFVH---WSSLAKDFLAWSEDTFSPDEHFWATLVRVPGVPGEVPRSD 338

  Fly   464 HCTSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWPRLQATEQKSL---------- 518
            ...|.:.:..|:..|...:                 ||..||    ......:|:          
Zfish   339 PEISELISKTHLVKWSYLE-----------------NDLYPE----CTGVSVRSVCIYGAAELRW 382

  Fly   519 ------FFARKFEPVINQAVLLQLEEWL 540
                  :||.|.:|.::..::..|||.|
Zfish   383 LLNYGHWFANKVDPTVDPVLIECLEEKL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 13/50 (26%)
Branch 250..503 CDD:280621 72/280 (26%)
Xylo_C 537..710 CDD:289306 3/4 (75%)
gcnt4b.2XP_005161276.1 Branch 116..383 CDD:280621 75/306 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592266
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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