DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oxt and Wscd2

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_796266.2 Gene:Wscd2 / 320916 MGIID:2445030 Length:571 Species:Mus musculus


Alignment Length:706 Identity:143/706 - (20%)
Similarity:232/706 - (32%) Gaps:237/706 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WLKRYRAF---------FLILLLIVAIQLFLAYKSLDIVGGGSGSGFDAAEAPASPPPPHAQARV 64
            |.|..|.|         |..||.|     :|...||..:    .|||  ...||.|     |::.
Mouse     5 WFKFQRCFRYFRRKPVRFFTLLAI-----YLTAGSLVFL----HSGF--VGQPAVP-----QSQA 53

  Fly    65 QPPARTKLTAQQLGFQPECDILAR------EAISALQR----AKTKDCREHIAQIACAIQAGRFY 119
            .|.|.:.:...:|.|..:.. |.|      ||.|..:|    .|.||..|. |::.   ..|..:
Mouse    54 SPAAGSPVEGAELPFLGDLH-LGRGFRDTVEASSIARRYGPTFKGKDTSER-AKLG---DYGGAW 113

  Fly   120 APQLRSSCPAGNHTANVS-----LGCFKDEKDRRLLAGYYSSSKTSNSPAKCVELCLQSGYPYAG 179
            :..|:.............     :||:.|:...|.|.|.........:..:|.:.|.:.||.|||
Mouse   114 SRALKGRVVREKEKEKEEEKAKYIGCYLDDTQSRALRGVSFFDYKKMTVFRCQDNCAERGYLYAG 178

  Fly   180 VQYGRECFCGYDPPPKASKLPDSSCNTKCLGNAKEICGGFYAMNIYETGIAKFTAQLAATTPSEE 244
            :::|.||:||:  ..:|:.:.:|.|:.:|.|....:|||...:::|...:|:           |.
Mouse   179 LEFGAECYCGH--KIQAANVSESDCDMECKGERGSVCGGINRLSVYRLQLAQ-----------ES 230

  Fly   245 TKRVRIAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARKR 309
            .:|...|   ...| ..|:.:.|..||.....:..:.||:..|      |..|.:||...||   
Mouse   231 ARRYGSA---VFRG-CFRRPNNLSLALPVSAAMPNMSVDKCVD------LCTEKEFPLAALA--- 282

  Fly   310 FSTIWGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDFLSANPGRNFVKGHGR 374
                 |.|        |         |..|    ..:.||:                     |.|
Mouse   283 -----GTA--------C---------HCGF----PTTRFPL---------------------HDR 300

  Fly   375 ETQKFIQKQGLDKTFVECDTHMW-----------RIGDRK-LPAGIQ--------VDGGSDWV-- 417
            |.::...::...:.|..|.|..:           |..||: |||..:        ...|:.|.  
Mouse   301 EDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARH 365

  Fly   418 ------------------ALSRPFVGYVTHPR-------EDDELLQALLKLFRHTLLPAESFFHT 457
                              ..::.|.|...|.|       :..|..|..::.|...:|        
Mouse   366 LIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAIL-------- 422

  Fly   458 VLRNTKHCTSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWPRLQATEQKSLFFAR 522
            ::||.....        :..:.||.|....:.....|        |.::||.          |.|
Mouse   423 LIRNPYKAL--------MAEFNRKYGGHIGFAAHAHW--------KGKEWPE----------FVR 461

  Fly   523 KFEPVINQAVLLQLEEWLYGPYTSEYANLHGYWQSLYHHEDVHGSGDDLARSIGD--SVMRLSAR 585
            .:.|            | :..:|.::... |....:.|.||:.   .||...:|.  |::.::.|
Mouse   462 NYAP------------W-WATHTLDWLKF-GKTVLVVHFEDLK---QDLFTQLGRMVSLLGVAVR 509

  Fly   586 QAKLYPLELIELTHY-------LHRDQYKGFLVR------------YRARGSTGKP 622
            :.:|..:|..:..::       |..|.|...:.|            .|:|..||.|
Mouse   510 EDRLLCVESQKDGNFKRSGLRKLEYDPYTAEMRRTIAAYIRMVDTALRSRNLTGVP 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 24/79 (30%)
Branch 250..503 CDD:280621 50/299 (17%)
Xylo_C 537..710 CDD:289306 22/107 (21%)
Wscd2NP_796266.2 WSC 134..225 CDD:214616 27/92 (29%)
WSC 236..330 CDD:214616 28/153 (18%)
Sulfotransfer_3 <421..>513 CDD:389806 24/142 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847055
Domainoid 1 1.000 62 1.000 Domainoid score I10298
eggNOG 1 0.900 - - E1_KOG4157
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.830

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