DRSC/TRiP Functional Genomics Resources

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Protein Alignment oxt and Gcnt2

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_001001511.1 Gene:Gcnt2 / 306860 RGDID:1303198 Length:400 Species:Rattus norvegicus


Alignment Length:320 Identity:93/320 - (29%)
Similarity:147/320 - (45%) Gaps:38/320 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 TTP-SEETKRVRIAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLL-ELESKFP 301
            |:| |||.....:|:::.:. :......||.:|:|.|::||.:|||.:....:::.: .|.|.||
  Rat    83 TSPLSEEEADFPLAYVMVIY-KDFDTFERLFRAIYMPQNVYCVHVDSKAAETFKEAVRHLLSCFP 146

  Fly   302 NIRLARKRFSTIWGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDFLSANPGR 366
            |..||.:....::||.|.|...|.||.||:.|...|.:|||....|||:||..::|.:|....|:
  Rat   147 NAFLASRMERVVYGGFSRLQADLNCMRDLVASKVPWKYVINTCGQDFPLKTNKEIVQYLKGFKGK 211

  Fly   367 NFVKG-----HGRETQKFIQKQ--GLDKTFVECDTHMWRIGDRKLPAGIQVDGGSDWVALSRPFV 424
            |...|     |.....|::.|:  |.|..|:: :|:..:...   |..:.:..|:.:|||:|.||
  Rat   212 NLTPGVLPPEHVITRTKYVYKERKGRDGYFMQ-NTNTLKTPP---PHKLVIYFGTAYVALTRDFV 272

  Fly   425 GYVTHPREDDELLQALLKLFRHTLLPAESFFHTVLR-----NTKHCTSYVDNNLHVTNWK--RKQ 482
            .::.    :|:....||:..:.|..|.|.|:.|:.|     ......|:. .||....||  ..|
  Rat   273 NFIL----NDKRAIDLLEWSKDTYSPDEHFWVTLNRIPGVPGAMPNASWT-GNLRAVKWKDMESQ 332

  Fly   483 GCKCQYKHVVDWCGCSPNDFKPEDWPRLQATEQKSLFFARKFE----PVINQAVLLQLEE 538
            ...|...:|.|.|.....|        ||........||.|||    |:..:.:.|:|.|
  Rat   333 NGACHGHYVHDICIYGNGD--------LQWLINSQSLFANKFEVNTYPLTVECLELRLRE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068
Branch 250..503 CDD:280621 77/267 (29%)
Xylo_C 537..710 CDD:289306 1/2 (50%)
Gcnt2NP_001001511.1 Branch 95..356 CDD:280621 79/278 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350563
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0799
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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