DRSC/TRiP Functional Genomics Resources

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Protein Alignment oxt and Gcnt4

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_001159537.1 Gene:Gcnt4 / 218476 MGIID:2684919 Length:455 Species:Mus musculus


Alignment Length:396 Identity:97/396 - (24%)
Similarity:170/396 - (42%) Gaps:77/396 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SKLPDSS----CNTKC----------LGNAKEI---------CGGFYAM----NIYETGIAKFTA 234
            ::.|:|.    .|..|          :|.:.||         .|...||    ::|:| :.::..
Mouse    59 NRFPESGDAARDNVNCSGVYEHEPLEIGKSLEIRRRSIIDLEDGDVVAMTSDCDVYQT-LRQYHE 122

  Fly   235 QLAATTPSEETKRVRIAFLLTLNGRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLL-ELES 298
            :|.    |.|.:...||:.|.::..|: .|.||::|:|...::|.||.|.:....::..: .|..
Mouse   123 KLV----SREEEDFPIAYSLVVHKDAI-MVERLIRAIYNQHNLYCIHYDLKSPDTFKAAMNNLAK 182

  Fly   299 KFPNIRLARKRFSTIWGGASLLTMLLQCMEDLLQSNWHWDFVINLSESDFPVKTLDKLVDFLSAN 363
            .||||.:|.|..:..:...|.|.....|:.|||:|:..|.:||||...|||:|:..:||..|.:.
Mouse   183 CFPNIFIASKLETVEYAHISRLQADWNCLSDLLKSSVQWKYVINLCGQDFPLKSNFELVTELKSL 247

  Fly   364 PGRNF---VKGHGRETQKF-----IQKQGLDKTFVECDTHMWRIGDRKLPAGIQVDGGSDWVALS 420
            .|||.   |:....:|::|     :::...|...:...|:   :.....|..|||..||.:..||
Mouse   248 QGRNMLETVRPPSAKTERFTYHHELRQVPYDYMKLPVKTN---VSKGAPPHNIQVFVGSAYFVLS 309

  Fly   421 RPFVGYVTHPREDDELLQALLKLFRHTLLPAESFFHTVLR---------NTKHCTSYVDNNLHVT 476
            |.||.|:.    :..|::......:.|..|.|.|:.|::|         ::....|.:.:...:.
Mouse   310 RAFVKYIF----NSSLVEDFFAWSKDTYSPDEHFWATLIRIPGIPGGISSSSQDVSDLQSKTRLV 370

  Fly   477 NWKRKQGC---KCQYKHVVDWC--GCSPNDFKPEDWPRLQATEQKSLFFARKF----EPVINQAV 532
            .|...:|.   .|...|:...|  |.:          .|:....:..:||.||    :|::.:.:
Mouse   371 KWFYYEGFLYPNCTGSHLRSVCIYGAA----------ELRWLLNEGHWFANKFDSKVDPILMKCL 425

  Fly   533 LLQLEE 538
            ..:|||
Mouse   426 AEKLEE 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 7/43 (16%)
Branch 250..503 CDD:280621 73/275 (27%)
Xylo_C 537..710 CDD:289306 2/2 (100%)
Gcnt4NP_001159537.1 Branch 134..402 CDD:391737 74/285 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847057
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0799
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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