DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oxt and sqv-6

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_503359.2 Gene:sqv-6 / 190099 WormBaseID:WBGene00005024 Length:806 Species:Caenorhabditis elegans


Alignment Length:909 Identity:272/909 - (29%)
Similarity:421/909 - (46%) Gaps:171/909 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RYRAFFLILLLIVAIQLFLAYKSLD--IVGGGSGSGFDAAEAPASPPPPHAQARVQPPARTKLTA 74
            :||.:.:::.|...:.::|.|.:..  .||.......|:.|..::|                   
 Worm     8 KYRDYAIVISLFFLLNVYLLYNTAQHTQVGNSKHISSDSGEKTSNP------------------- 53

  Fly    75 QQLGFQPECDILAREAISALQRAKTKDCREHIAQIACAIQAGRFYAPQLRSSCPAGNHTANV--- 136
                 .|.|:|....|.||:.||.|..|:..:...||.::.|.|......:.||  ||.:.:   
 Worm    54 -----LPSCEITDDLAKSAISRAITPSCKAKLQLEACQLKNGTFTINFPENQCP--NHDSRLIDQ 111

  Fly   137 SLGCFKDEKDRRLLAGYYSSSKTSNSPAKCVELCLQSGYPYAGVQYGRECFCGYDPPPKASKLPD 201
            .:|||.|:|:.|:|..:......||..|.|.:.|.::|:.|.|:::|.|||||.| ...|:.:.|
 Worm   112 RIGCFLDKKEARVLTEFEYKLPKSNGKATCRKHCYKAGFLYFGLEFGHECFCGND-VSNATAVDD 175

  Fly   202 SSCNT-KCLG--NAKEICGGFYAMNIYETGIAKFTAQLAAT--TPSEETKR--VRIAFLLTLNGR 259
            ..|.. ||.|  |::|.||||.|:.|:.||..........|  .||.::.:  |:|.|||.||||
 Worm   176 VECRAYKCPGNENSEEFCGGFNAVEIFRTGFRSKVNHRKPTYLPPSSDSIKNPVKILFLLQLNGR 240

  Fly   260 ALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARKRFSTIWGGASLLTMLL 324
            ..|||.|.||::|.|.|.||||||.||:|::.::.::.....||.:..:||||||||||||.|.|
 Worm   241 NERQVKRFLKSIYLPHHYYYIHVDARQNYMFSEMQKVADFLDNIHITERRFSTIWGGASLLQMFL 305

  Fly   325 QCMED--LLQSNWHWDFVINLSESDFPVKTLDKLVDFLSANPGRNFVKGHGRETQKFIQKQGLDK 387
            |.:.|  .::....||::||.||||||:..:......::.|.|::|:..||..|.|||||||.:.
 Worm   306 QVIRDSMKIEKFKDWDYIINFSESDFPILPISDFERLITVNNGKSFLASHGYNTGKFIQKQGFEY 370

  Fly   388 TFVECDTHMWRIGDRKLPAGIQVDGGSDWVALSRPFVGYVTHPREDDELLQALLKLFRHTLLPAE 452
            .|.|||..|:|||.|:.|..:::|||||||.:.|....:..   .|:||.:.|.|.:...|||.|
 Worm   371 VFSECDNRMFRIGKREFPQNLRIDGGSDWVGIHRNLAEFSI---SDEELPRKLRKTYESILLPLE 432

  Fly   453 SFFHTVLRNTKHCTSYVDNNLHVTNWKRKQGCKC-QYKHVVDWCGCSPNDFKPEDWPR--LQATE 514
            ||:||:..|::.|...:.:||.:|||.|||||:| ..|.:||||||||..|:.|...:  ||...
 Worm   433 SFYHTLAFNSEFCDDLLMSNLRLTNWYRKQGCRCASLKPIVDWCGCSPLVFREETMKKFELQKAI 497

  Fly   515 QKSLFFARKFEPVIN---------QAVLLQLEEWLYGPYTSEYANLH--GYWQSLYHHEDVHGSG 568
            .|..:|||||:.:::         |::..:..:..:..|...:||:.  |..:...|.|      
 Worm   498 SKPTYFARKFDSMVDIDSIEAAEMQSISPEKLQLNHPTYHFAFANIFKTGIDEQKLHFE------ 556

  Fly   569 DDLARSIGDSVMRLSARQAKLYPLELIELTHYLHRDQYKGFLVRYRARGSTGKPL-HLETRVRPT 632
                 |:.:..::.:..:||...:..|:.....|....:..:......|:|.:.| |..:.|..|
 Worm   557 -----SLANFALKSTETRAKFRKVLRIDALRAHHNALIEIVMKIETTDGATFEFLIHRLSHVNLT 616

  Fly   633 Q-QGKLARNARFSKRLRNFEVSTDFDQKEQIARNFGKLLGPQSDLLLSYTLQANADSGAASHSYN 696
            : :.||..:...   ||.....|.|:.||::.|.:   :|..:|   :.||..            
 Worm   617 ENEEKLVEHGYL---LRAVSFGTKFEWKEELCREY---MGFVTD---NDTLHT------------ 660

  Fly   697 LTLLWIDPLGRLQDFNELHVE---DSTSD--VINHSK-------TLLK--HPITPGIWTAKLIGR 747
                      |||.....||:   |.||.  :..:.|       |::|  ..:..|.:.:..:|:
 Worm   661 ----------RLQWHPTEHVKKVGDKTSPEMIFKYRKGDELIEQTVVKPYDSVFGGQFDSWNVGK 715

  Fly   748 --NSIYAQLKF---LIAPLAYYKGYPLAKSSDAEALNAGLTVALPEDFEMPVEWQQHLQTDDEQF 807
              :::.....|   :|:|.:.....|||            |:..|            :.||    
 Worm   716 KLSNLTTCSNFFVDIISPSSPDDAPPLA------------TLHFP------------VYTD---- 752

  Fly   808 TMREESLAKGKMLGQELHSWIDGLVGQFFQLRESCVVEADSEVSLPLCSDAPWSSLAPDPKSDV 871
                          |..|..:|.| .|||::.:.|       .|...|.:..||:..||||||:
 Worm   753 --------------QNAHCHVDYL-RQFFKIADFC-------TSGDACKEKIWSTSYPDPKSDI 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 31/82 (38%)
Branch 250..503 CDD:280621 120/255 (47%)
Xylo_C 537..710 CDD:289306 32/176 (18%)
sqv-6NP_503359.2 WSC 113..195 CDD:280068 31/82 (38%)
Branch 246..485 CDD:280621 110/241 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159339
Domainoid 1 1.000 227 1.000 Domainoid score I1423
eggNOG 1 0.900 - - E1_KOG0799
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 387 1.000 Inparanoid score I1157
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D258128at33208
OrthoFinder 1 1.000 - - FOG0003123
OrthoInspector 1 1.000 - - oto18390
orthoMCL 1 0.900 - - OOG6_102671
Panther 1 1.100 - - LDO PTHR46025
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2902
SonicParanoid 1 1.000 - - X616
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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