DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oxt and gly-1

DIOPT Version :9

Sequence 1:NP_647705.1 Gene:oxt / 38288 FlyBaseID:FBgn0015360 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_496345.1 Gene:gly-1 / 174679 WormBaseID:WBGene00001626 Length:472 Species:Caenorhabditis elegans


Alignment Length:358 Identity:86/358 - (24%)
Similarity:143/358 - (39%) Gaps:57/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 KCVELCLQSGYP-YAGVQYGRECFCGYDPPPKASKLPD--SSCNTKCLG--NAKEICGG------ 218
            |.:...|.|.:. |..::.|   |..|...|:..||.:  ..||:...|  |.::|...      
 Worm    30 KIISQFLYSSFTVYIVLRLG---FVDYSLVPENRKLENIPLECNSVINGTENRRKISRARQWDWH 91

  Fly   219 --------FYAMNIYETGIAKFTAQLAATTPSEETKRVRIAFLLTLNGRALRQVHRLLKALYAPE 275
                    |.:.|:..| |.|: ........|.|.....:|:.|.:. :.:.||...:...|.|:
 Worm    92 FDWVEHEIFNSRNVCST-IDKY-FNFTRIPSSREEAEYPLAYGLVVY-KTIVQVLTQMSLFYQPQ 153

  Fly   276 HVYYIHVDERQDYLYRKLLE-LESKFPNIRLARKRFSTIWGGASLLTMLLQCMEDLLQSNWHWDF 339
            |::.|.||::....|:.::: |.|.|||:.:.....|. ||...:|..:..|...|.:|...|.:
 Worm   154 HMFCITVDDQSPNEYKSVIQALPSCFPNMHVFIGEPSQ-WGSFGILKNVYTCFNWLSKSKQKWKY 217

  Fly   340 VINLSESDFPVKTLDKLVDFLSANPGRNFVKGHGRETQKFIQKQGLDKTFVECDTHMWRIGDRKL 404
            ...||.:|.|::|..::|....|..|.........|..::...:|:                  |
 Worm   218 YQYLSGTDLPIRTNLEMVRIFKALNGSMNTDVSTFEVDRYKNMEGV------------------L 264

  Fly   405 PAGIQVDGGSDWVALSRPFVGY-VTHPREDDELLQALLKLFRHTLLPAESFFHTVLRNTKHCTSY 468
            |. :.|...|..|.:.|....| ::.||     :|.|||....|.:|.|||:.|||.:.  ....
 Worm   265 PP-MPVYKSSMSVVVPREGADYLISSPR-----VQKLLKYLSKTWIPDESFWSTVLGSP--ALLP 321

  Fly   469 VDNNLHVTN--WKRKQ-GCKCQYKHVVDWCGCS 498
            |..::.|.:  |.||. ..:..|::.|:..|.|
 Worm   322 VPGSIRVRDILWLRKNFKLRPPYENTVNSIGTS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oxtNP_647705.1 WSC 138..218 CDD:280068 15/57 (26%)
Branch 250..503 CDD:280621 64/254 (25%)
Xylo_C 537..710 CDD:289306
gly-1NP_496345.1 Branch 129..321 CDD:280621 55/219 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0799
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

Return to query results.
Submit another query.