DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment oxt and wscd2

DIOPT Version :9

Sequence 1:	NP_647705.1	Gene:	oxt / 38288	FlyBaseID:	FBgn0015360	Length:	876	Species:	Drosophila melanogaster
Sequence 2:	NP_001106553.1	Gene:	wscd2 / 100127745	XenbaseID:	XB-GENE-6039192	Length:	230	Species:	Xenopus tropicalis

Alignment Length:	258	Identity:	62/258 - (24%)
Similarity:	97/258 - (37%)	Gaps:	71/258 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RWLKR--YRAF-FLILLLIVAIQLFL--AYKSLDIVG-------GGSGSGFDAAE---APAS--- 54
            |:.:|  .|.| |:||.|.....:||  :::...||.       .|:.:|.|..|   ||.|
Frog    10 RYFRRKPVRFFTFIILYLTAGSVVFLHASFEGEQIVSDNDKTSVDGTSNGPDVQELGIAPLSRVF 74

  Fly    55 ---PPPPHAQARVQP---------PARTKLTAQQLGFQPECDILAREAISALQRAKTKDCREHIA 107
               |..|....|..|         |.|.|        |.|.......|:......:.::||...
Frog    75 KEVPESPSTHRRYGPWLKTPGKELPERIK--------QGEFGGTWNRALKGRSMREQEECRAKY- 130

  Fly   108 QIACAIQAGRFYAPQLRSSCPAGNHTANVSLGCFKDEKDRRLLAGYYSSSKTSNSPAKCVELCLQ 172
                                          :||:.|:..:|.|.|.........:..:|.:.|.:
Frog   131 ------------------------------IGCYTDDTRQRALRGVSFFDYKKMTVFRCQDNCAE 165

  Fly   173 SGYPYAGVQYGRECFCGYDPPPKASKLPDSSCNTKCLGNAKEICGGFYAMNIYETGIAKFTAQ 235
            .||.|||:::|.||:||:  ..||..:.:|.||.:|.|.....|||...::||...:.:.:|:
Frog   166 RGYMYAGLEFGAECYCGH--RIKALNVSESECNMECKGEKGNFCGGVNRLSIYRLELNQESAR 226

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
oxt	NP_647705.1	WSC	138..218	CDD:280068	26/79 (33%)
		Branch	250..503	CDD:280621
		Xylo_C	537..710	CDD:289306
wscd2	NP_001106553.1	WSC	127..219	CDD:214616	31/124 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	64	1.000	Domainoid score	I9958
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000