DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and AT1G26100

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_173935.1 Gene:AT1G26100 / 839151 AraportID:AT1G26100 Length:236 Species:Arabidopsis thaliana


Alignment Length:244 Identity:78/244 - (31%)
Similarity:121/244 - (49%) Gaps:23/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NMDPALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFN-WHPLFMTIGFIYLYG 160
            ::||:.::   |.:..:|.||.:.|.|..|       .....|.|:.:: .|||.|.||||.:.|
plant     3 SVDPSRLS---LVLFARLSGLVVAVSVLYW-------ALFLPNLGLSYSTLHPLLMVIGFILVSG 57

  Fly   161 NSILIYRGFRTTRKKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAV 225
            .:|||:|....:| ||.|..|..:...|....|..:.|.|   :.......|.||||||:||.:|
plant    58 EAILIHRWLPGSR-KTKKAVHLWLQGMALASAVFGIWTKF---HYQRGVFANFYSLHSWMGLLSV 118

  Fly   226 IVFSLQYVAGFVAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYST 290
            .:|:.|:|.||::|...|.....|...:|.|::.||:.:.||||:|..|:.||..| ::|.  ..
plant   119 SLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHVFLGLYTYGLAIATAETGLLEKLTF-LQTK--RN 180

  Fly   291 LPPAG---VLANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSS 336
            :|..|   :..|.:|:...:.|.:|:..|..|.|:..  ..|..|:.||
plant   181 VPRRGSESMTVNGLGLGLALLGCIVITAAILPKYQSH--SRDEKLVYSS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766 2/5 (40%)
Cyt_b561_CG1275_like 120..336 CDD:176494 70/219 (32%)
AT1G26100NP_173935.1 PLN02351 1..236 CDD:215201 78/244 (32%)

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