DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and CYB-1

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_198679.1 Gene:CYB-1 / 833853 AraportID:AT5G38630 Length:230 Species:Arabidopsis thaliana


Alignment Length:221 Identity:75/221 - (33%)
Similarity:116/221 - (52%) Gaps:5/221 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 PALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLA-GTSNPGVEFNWHPLFMTIGFIYLYGNSI 163
            |.|..|.: :::.::.|..:..||.||...:.|||| .:.|....||.||:.|.||.|...|.::
plant     4 PVLGGFPI-FMVVRVLGFIIAALVLTWTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAM 67

  Fly   164 LIYRGFRTTRKKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVF 228
            |.|:..:.| |...||.|..:.:.||||::|.:......|  .:..|.|.|||||||||:.:.:|
plant    68 LAYKSVQGT-KNLKKLVHLTLQLTAFILSLIGVWAALKFH--IDKGIENFYSLHSWLGLACLFLF 129

  Fly   229 SLQYVAGFVAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPP 293
            :.|:.||||.:..||...|.|.::||.|::.|:..:.||:.:|..||.||..|.......:....
plant   130 AFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYST 194

  Fly   294 AGVLANVIGVMYVVFGALVVYLATEP 319
            ..:|.|.:||:.::.|..|:.....|
plant   195 EAMLVNTMGVLILILGGFVILGVVTP 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766 1/2 (50%)
Cyt_b561_CG1275_like 120..336 CDD:176494 71/201 (35%)
CYB-1NP_198679.1 PLN02680 1..230 CDD:215365 75/221 (34%)

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