DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and cybrd1

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001018336.3 Gene:cybrd1 / 552960 ZFINID:ZDB-GENE-050522-365 Length:253 Species:Danio rerio


Alignment Length:237 Identity:112/237 - (47%)
Similarity:155/237 - (65%) Gaps:6/237 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 FKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGF 169
            |.:.::|..:.|:..|.:..:|:..:..|| |......|||||||.|.||||:|.|.:|::||..
Zfish     7 FLLFFILASVVGIVSIAVALSWVLHYREGL-GWDGGAAEFNWHPLLMVIGFIFLQGIAIVVYRLP 70

  Fly   170 RTTR--KKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQY 232
            .|.|  |:.:||.|||:|:.||||.||::..||..||..|  ||||||||||:||:||:::..|.
Zfish    71 WTWRCSKQMMKLIHAGLHILAFILAVISVVAVFVFHNAKN--IPNMYSLHSWVGLAAVVLYPSQI 133

  Fly   233 VAGFVAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGVL 297
            |.|...:|.|......|.|:||||||.|||.|:..||:||||||||.||::|:|||...||..||
Zfish   134 VLGIAVYLIPVTPVRVRAALMPLHIYSGLFIFISVIAAALMGITEKLIFSLKSPAYKDSPPEAVL 198

  Fly   298 ANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSSSVN 339
            .||:|::...||||||::||..::|| |..|....|::::.:
Zfish   199 VNVLGLLIAAFGALVVWIATRSAWKR-PREETAQTLSNNTTS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766
Cyt_b561_CG1275_like 120..336 CDD:176494 109/217 (50%)
cybrd1NP_001018336.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..253 2/13 (15%)
Blue background indicates that the domain is not in the aligned region.

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