DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and cybrd1

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001165750.1 Gene:cybrd1 / 548408 XenbaseID:XB-GENE-1011687 Length:283 Species:Xenopus tropicalis


Alignment Length:233 Identity:103/233 - (44%)
Similarity:145/233 - (62%) Gaps:6/233 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 NFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLFMTIGFIYLYGNSILIYRG 168
            :|.|..|.:.|.|...::....|:.....|| |......||||||:.:|.|||::.|.:|::||.
 Frog     6 SFLVFLVSSLLLGFLGVIFTLVWVLHWREGL-GWDGGAAEFNWHPVLVTSGFIFIQGIAIIVYRL 69

  Fly   169 FRT--TRKKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQ 231
            ..|  ..|..:|..|||:|:.|.:.|::||..|||.||..|  ||||||||||:||:.||:::||
 Frog    70 PWTWNCSKLLMKFIHAGLHLTALVFTIVALVAVFDFHNAKN--IPNMYSLHSWIGLTVVILYALQ 132

  Fly   232 YVAGFVAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGV 296
            .|.|...:|.|..|:..|.|:||:|:|.||..|...||:||||||||.||::|.|.||.:||..:
 Frog   133 LVLGVSIYLLPFARDTLRAALMPVHVYSGLLIFGTVIATALMGITEKLIFSLKEPPYSKMPPEAI 197

  Fly   297 LANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLN 334
            ..|..|::.:|||.|||::.|.|::|| |..::...||
 Frog   198 FVNTFGLIILVFGGLVVWMVTTPAWKR-PREQEIKALN 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766
Cyt_b561_CG1275_like 120..336 CDD:176494 98/217 (45%)
cybrd1NP_001165750.1 Cyt_b561_CYBRD1 34..186 CDD:176495 76/154 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..263 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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