DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and cyb561

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001005633.1 Gene:cyb561 / 448092 XenbaseID:XB-GENE-955821 Length:246 Species:Xenopus tropicalis


Alignment Length:221 Identity:85/221 - (38%)
Similarity:139/221 - (62%) Gaps:9/221 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 TQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGFRTTRKKT 176
            :|:.|:.::.:...|:.|:.||.: .|.| ::||.|||.|.:|.::|.|.::|:||.||...|:.
 Frog    19 SQILGIAVLAITGAWLSQYRGGFS-WSGP-LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRA 81

  Fly   177 LKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGFVAFLA 241
            .|:.|..:|:.|.:::::.:..||..|. || ...:|||||||.|::...::.||::.||:.|..
 Frog    82 TKILHGVLHVMALVISLVGIIAVFQFHK-AN-GYADMYSLHSWCGITTFSLYILQWIIGFLLFFV 144

  Fly   242 PGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGVLANVIGVMYV 306
            ||:...||....|||.:||...|:.:||::|:|:||| :|:    .||..|..|||.|.:||:.|
 Frog   145 PGVAYTYRSRFKPLHEFFGRALFLSSIATSLLGLTEK-MFS----DYSQRPAEGVLVNTLGVLLV 204

  Fly   307 VFGALVVYLATEPSYKRKPIPEDTAL 332
            ||||::.|:.|...::|.|:||:.||
 Frog   205 VFGAVIAYILTREEWRRPPLPEEQAL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766
Cyt_b561_CG1275_like 120..336 CDD:176494 83/213 (39%)
cyb561NP_001005633.1 Cytochrome_b_N 27..230 CDD:474033 81/211 (38%)
Blue background indicates that the domain is not in the aligned region.

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