DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and Cyb561

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_038942091.2 Gene:Cyb561 / 303601 RGDID:1310987 Length:264 Species:Rattus norvegicus


Alignment Length:237 Identity:92/237 - (38%)
Similarity:147/237 - (62%) Gaps:15/237 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 PALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLFMTIGFIYLYGNSIL 164
            ||.:.:.|.:  :||.|||::.:...|:|.:.||:|..|:  ::||.|||.|.:|.|:|.|:::|
  Rat    23 PAALPYYVAF--SQLLGLTVVAVTGAWLGLYRGGIAWESS--LQFNVHPLCMVMGMIFLQGDALL 83

  Fly   165 IYRGFRTTRKKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFS 229
            :||.||...|:|.|:.|..:|:.|||:.::.|..|||.|.  .....::||||||.|:|..:::.
  Rat    84 VYRVFRKEAKRTTKILHGLLHIFAFIIALVGLVAVFDYHK--KKGYADLYSLHSWCGISVFVLYF 146

  Fly   230 LQYVAGFVAFLAPG----LRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYST 290
            :|::.||..||.||    ||..||    |.|.:||...|:|::.:||:|:.|..:|.:.: .|||
  Rat   147 MQWLVGFSFFLFPGASFSLRSRYR----PQHTFFGATIFLLSVGTALLGLKEALLFKLGS-KYST 206

  Fly   291 LPPAGVLANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTAL 332
            ..|.||||||:|::.:.||.:|:|:..:..:||....|:.||
  Rat   207 FEPEGVLANVLGLLLICFGVVVLYILAQADWKRPTQAEEQAL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766 2/2 (100%)
Cyt_b561_CG1275_like 120..336 CDD:176494 84/217 (39%)
Cyb561XP_038942091.2 None

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