DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1275 and Cybrd1

DIOPT Version :10

Sequence 1:NP_647703.1 Gene:CG1275 / 38286 FlyBaseID:FBgn0035321 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001011954.1 Gene:Cybrd1 / 295669 RGDID:1305740 Length:286 Species:Rattus norvegicus


Alignment Length:238 Identity:95/238 - (39%)
Similarity:139/238 - (58%) Gaps:6/238 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 FKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGF 169
            |..|.|...|.|...::.|..|: .||....|.....:||||||:....||:::.|.:|::||..
  Rat     9 FLGLLVSALLVGFLSVIFVLIWV-LHFREGLGWDGGALEFNWHPVLAVTGFVFIQGIAIIVYRLP 72

  Fly   170 RTTR--KKTLKLTHAGIHMGAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQY 232
            .|.:  |..:|..|||::..|.||.:|::..|||.||:..  ||:|||||||:||:.:|::..|.
  Rat    73 WTWKCSKFLMKSIHAGLNAVAAILAIISVVAVFDYHNVRK--IPHMYSLHSWVGLTVLILYIQQL 135

  Fly   233 VAGFVAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGVL 297
            |.||..||.|....:.|..:||:|:|.||..|...||:.|||:|||..|.:|.|:|.:.||.||.
  Rat   136 VVGFFIFLLPWAPPSLRAIVMPIHVYSGLLLFGTVIATVLMGVTEKLFFVLKNPSYHSFPPEGVF 200

  Fly   298 ANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTAL-LNSSSVN 339
            .|.:|::.:|||||:.::.|.|.:||...|....| ||..:.:
  Rat   201 TNTLGLLILVFGALIFWIVTRPQWKRPREPGSIPLQLNGGNAD 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1275NP_647703.1 rne <5..103 CDD:236766
Cyt_b561_CG1275_like 120..336 CDD:176494 90/218 (41%)
Cybrd1NP_001011954.1 Cytochrome_b_N 36..188 CDD:474033 64/153 (42%)
Blue background indicates that the domain is not in the aligned region.

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