DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXD and gucy2cb

DIOPT Version :9

Sequence 1:NP_620469.2 Gene:ACXD / 38284 FlyBaseID:FBgn0040507 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_021329920.1 Gene:gucy2cb / 568219 ZFINID:ZDB-GENE-130531-31 Length:1071 Species:Danio rerio


Alignment Length:568 Identity:119/568 - (20%)
Similarity:229/568 - (40%) Gaps:138/568 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSYFDSAIEYNRSNPISLARTSSQAQTVQNEKNWEWSYLVRKCRNLELEDSYDLYMRRLRVGYL 65
            :.|...:.:|.|..|.|||        .::.:.....:|::|:.|       ||..:..|:...|
Zfish   462 ISSQLITPLELNEWNMISL--------KIEEDSTENSTYILRRAR-------YDKKIVILKEFRL 511

  Fly    66 SLFIFIHVAVTVIHTLLLL-------------------------TTPEIKYVYVDMVAYMCSGLV 105
            :...|.......::|||.:                         ....::||..|.::|.....:
Zfish   512 TDGSFTEKQRIELNTLLKIDYCNLTKFYGTVKFDNEYFGVFEYGERGSLRYVLDDKISYPEETFM 576

  Fly   106 IW---------VVLGVNF-RSELVSKHGWVVYATSWLAVCV----MV--LMDIGLNVYHATSHND 154
            .|         :..|::: .:..::.||.:....     ||    ||  :.|.|.|.        
Zfish   577 DWQFKISVMYDIAKGMSYLHTSNIAVHGRLKSTN-----CVVDNRMVVKIADFGFNT-------- 628

  Fly   155 ILNPIYDAYTLYAIYMFMPVP-YLLQPFVLGSAVTFCYIINYSFVITAKDDNQMHSILNEAIYLS 218
            |::|..|.:|         .| :|.:|.:......:.:.|....::..|.....::..:.|..|:
Zfish   629 IVSPSEDLWT---------APEHLRKPGISQKGDVYSFAIISQEIMMRKCTFYTNTCSDRAEKLA 684

  Fly   219 CVNLLGI--FFRLMRDIALRTTFLDRRQYVEENLLLRYARDQERSLLLSILPAQIAD--RLQEDV 279
            .|.....  |||  .|:...:|   .....|..:|:|...|::        |.:..|  :::..:
Zfish   685 RVQYPSTTSFFR--PDLNFEST---SESEEEVCMLIRNCWDED--------PDRRPDFKKIEIAL 736

  Fly   280 KNRIERSKQQHQ----------QQSQVDLRRSADSQTLKRWRQPDHG------------------ 316
            ...:.|..|:|:          |....:|.|..:.:|.....:.|..                  
Zfish   737 WKIVSRDNQEHESYMENLIRRLQMYSRNLERLVEERTALYKAERDRADCLNFMLLPGPVVRSLKE 801

  Fly   317 TLFIEPH--EDVTVLYADVVNYT---HLTTTLDVKKLVEALHDLFVRFDIASEEYNVLRIKFLGD 376
            |..:||.  ::||:.::|:|.:|   |.:|.::|   |:.|:|::..||...:.::|.:::.:||
Zfish   802 TGKVEPELFDEVTIYFSDIVGFTTLCHFSTPMEV---VDMLNDIYKNFDSILDNHDVYKVETIGD 863

  Fly   377 CYYCVAGLANPNAD-HAK--CCVDLGLRMIKDIRDVREKRHLNIDMRIGVHSGDVLSGVIGAAKW 438
            .|..|:||...|.: |||  |.:.|.:........:.....:.:.:|||||||...:||:|....
Zfish   864 AYMVVSGLPRRNGNRHAKDICLMALDILAFMGTIQLSHLPGIPVWIRIGVHSGPCAAGVVGIKMP 928

  Fly   439 QFDIWSKDVDIANRLEATGATGRVHVSQKTLSLL---DGEYFFEDGTE 483
            ::.::...|:.|:|:|:||...|:||||.|:::|   |.::.:|:..|
Zfish   929 RYCLFGDTVNTASRMESTGLPLRIHVSQSTINILQRTDCKFEYEERGE 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXDNP_620469.2 AC_N <42..284 CDD:292831 48/287 (17%)
CYCc 254..476 CDD:214485 64/262 (24%)
Nucleotidyl_cyc_III 321..503 CDD:299850 54/174 (31%)
CYCc 856..1117 CDD:214485
Nucleotidyl_cyc_III 878..1142 CDD:299850
gucy2cbXP_021329920.1 Periplasmic_Binding_Protein_Type_1 33..408 CDD:324556
PKc_like 471..741 CDD:328722 55/319 (17%)
CYCc 778..970 CDD:214485 54/194 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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