DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACXD and odr-1

DIOPT Version :10

Sequence 1:NP_620469.2 Gene:ACXD / 38284 FlyBaseID:FBgn0040507 Length:1162 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:588 Identity:113/588 - (19%)
Similarity:216/588 - (36%) Gaps:173/588 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSYFDSAIEYNRSNPISLARTSS--------------QAQTVQNEKNWEWSYLVRKCRNLELEDS 52
            |:.....:|...||..:.|..:|              :|:.||.::       :||....|....
 Worm   470 DAKMQRELENRASNTDNAAALTSRRRVFGSYALVGTQRAEYVQFKQ-------IRKINFPETTLD 527

  Fly    53 YDLYMRRLRVGYLSLFIFIHV-----AVTVIHTLLLLTTPE------------------------ 88
            |...:::|:...|:.|..|.|     .:|::|||:...|.|                        
 Worm   528 YLYSLKQLQHDNLAKFYGIQVNDDIMTMTILHTLVERGTLEEFCLDRDFGMDDTFKSAFMRDILK 592

  Fly    89 -IKYVYVDMVAY-------MCSGLVIWV----VLGV-NFRSELVSKHGWVVYATSWLAVCVMVLM 140
             ::|::...:.|       .|...:.||    :.|| ||.|:.:....  :......|..:....
 Worm   593 GLQYLHKSSIGYHGHLQASTCLIDINWVLKLTLYGVSNFMSDQLDAEN--IKVPEQAAHMITYPQ 655

  Fly   141 DIGLNVYHATSHND-------IL--NPIYDAYTLYAIYMFM---PVPY-LLQPFVLGSAVTFCYI 192
            .:.....|...::|       ::  :|..|.|.:..|:..|   ..|| |:......:|.....|
 Worm   656 YVCFPPEHIREYDDSGKQPPRVVRGSPKGDIYCVGMIFYMMVEREDPYHLIHSVERPNATLIKQI 720

  Fly   193 INYSFVITAKDDNQMHSILNE------------------------AIY-LSCVNLLGIFFR---- 228
            :|.:.:....||.:..::|.|                        .:| ||..||:....|    
 Worm   721 LNENHMPRITDDYRQENMLLEMCKECWDRNPDKRPTIKKLIESISTVYPLSKGNLVDQMIRMSEK 785

  Fly   229 ----LMRDIALRTTFLDRRQYVEENLLLRYARDQERSLLLSILPAQIADRLQEDVKNRIERSKQQ 289
                |.:.:|:||..|...|.            |...||..:|||.||    :|:||        
 Worm   786 YADELEQMVAIRTADLADAQM------------QTMRLLNEMLPASIA----KDLKN-------- 826

  Fly   290 HQQQSQVDLRRSADSQTLKRWRQPDHGTLFIEP--HEDVTVLYADVVNYTHLTTTLDVKKLVEAL 352
                                       .|.:.|  :|..||::..:.::..|......::::..|
 Worm   827 ---------------------------GLIMPPRSYESATVMFVQICDFNALMKRSSPEQVIAFL 864

  Fly   353 HDLFVRFDIASEEYNVLRIKFLGDCYYCVAGLANPNA-----DHAKCCVDLGLRMIKDIRDVREK 412
            :|::.:||...:.::..:::..|:.|...:|:.:.|.     :.|:  :.|.:|.|..|..::..
 Worm   865 NDIYDQFDTVIKRHDAYKVETTGETYMVASGVPHENEGRHIFEVAE--ISLEIREISYIYVLQHD 927

  Fly   413 RHLNIDMRIGVHSGDVLSGVIGAAKWQFDIWSKDVDIANRLEATGATGRVHVSQKTLSLL--DGE 475
            ::..:.:|||.|:|.:.:||||....::.::...|:.|:|:::.....::..|:.|..||  ..|
 Worm   928 KNYKLRIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHE 992

  Fly   476 YFF 478
            |.|
 Worm   993 YKF 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXDNP_620469.2 AC_N <42..284 CDD:318454 66/329 (20%)
Nucleotidyl_cyc_III 321..503 CDD:448371 37/167 (22%)
Nucleotidyl_cyc_III 878..1142 CDD:448371
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960
PK_GC 495..768 CDD:270894 46/281 (16%)
CYCc 803..996 CDD:214485 50/246 (20%)
Blue background indicates that the domain is not in the aligned region.

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