DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACXD and gc2

DIOPT Version :9

Sequence 1:NP_620469.2 Gene:ACXD / 38284 FlyBaseID:FBgn0040507 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_021333059.1 Gene:gc2 / 140425 ZFINID:ZDB-GENE-011128-8 Length:1120 Species:Danio rerio


Alignment Length:350 Identity:74/350 - (21%)
Similarity:150/350 - (42%) Gaps:78/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 NLLGIFFRLMRDIALRTTFLDRRQYVEENLLLRYARDQERSLLLSILPAQIADRLQEDVKNRIER 285
            |::....|::...:.....|.|.:..|    |...:.:...||..:||..:|:.|:         
Zfish   819 NIIDSMLRMLEQYSSNLEELIRERTEE----LEIEKQKTEKLLTQMLPPSVAEALK--------- 870

  Fly   286 SKQQHQQQSQVDLRRSADSQTLKRWRQPDHGTLFIEPHEDVTVLYADVVNYTHLTTTLDVKKLVE 350
                                 |....:|:|       .|.|::.::|:|.:|.::...:..::|:
Zfish   871 ---------------------LGTTVEPEH-------FESVSLYFSDIVGFTTISANSEPIEVVD 907

  Fly   351 ALHDLFVRFDIASEEYNVLRIKFLGDCYYCVAGLANPNAD-HAKCCVDLGLRMIKDIRDVREKRH 414
            .|:||:..||.....::|.:::.:||.|...:|:..||.: ||....::.|.::..:...| .||
Zfish   908 LLNDLYTTFDAVIGNHDVYKVETIGDAYMVASGVPVPNGNRHAAEIANMALDILSAVGTFR-MRH 971

  Fly   415 L---NIDMRIGVHSGDVLSGVIGAAKWQFDIWSKDVDIANRLEATGATGRVHVSQKTLSLL---- 472
            :   .:.:|||:|:|..::||:|....::.::...|..|:|:|:||...|:||...|:.:|    
Zfish   972 MPDVPVRIRIGLHTGPCVAGVVGLTMPRYCLFGDTVTTASRMESTGLPYRIHVHSSTVKILMELK 1036

  Fly   473 ------------------DGEYFF--EDGTEKAREDPVLQKHGIRTFLIKSLRAPMHDPRRRMRE 517
                              :..|:.  .||..|....|.:.|.|:.:   |..:..:....|::..
Zfish  1037 LGYRVELRARTELKGKRIEETYWLTGRDGFTKPLPVPPVLKSGLES---KDFKVMLKKAVRKIST 1098

  Fly   518 -RQVKKLSEASKANFMHNSTLHQYN 541
             |||.:|:.:.:.|.|    :|.::
Zfish  1099 VRQVAQLTLSDEGNVM----IHHHD 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXDNP_620469.2 AC_N <42..284 CDD:292831 12/62 (19%)
CYCc 254..476 CDD:214485 52/247 (21%)
Nucleotidyl_cyc_III 321..503 CDD:299850 50/209 (24%)
CYCc 856..1117 CDD:214485
Nucleotidyl_cyc_III 878..1142 CDD:299850
gc2XP_021333059.1 PBP1_sensory_GC_DEF_like 59..440 CDD:107366
PK_GC-2D 551..815 CDD:270945
HNOBA <824..869 CDD:311573 10/48 (21%)
CYCc 848..1040 CDD:214485 52/229 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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