DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9018 and rprd1b

DIOPT Version :10

Sequence 1:NP_647701.1 Gene:CG9018 / 38283 FlyBaseID:FBgn0035318 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001004796.1 Gene:rprd1b / 448020 XenbaseID:XB-GENE-949983 Length:325 Species:Xenopus tropicalis


Alignment Length:376 Identity:164/376 - (43%)
Similarity:229/376 - (60%) Gaps:57/376 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFMYLAND 65
            |::||:.||.|||:||::||||:|||||||||||||:|:||..|||||......:||||:|||||
 Frog     1 MASFTEPALEKKLSELSNSQQSVQTLSLWLIHHRKHAASIVTVWQRELRKAKSSRKLTFLYLAND 65

  Fly    66 VIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDPKTIADWRSRL 130
            ||||||:||||:.:|:..||...|:|:..:. .|.....|.|:|:||.||.||....|...|..:
 Frog    66 VIQNSKRKGPEFTREFENVLLDAFSHVSSEA-EDGCRKPLERLLHIWQERSVYSADFIQQLRLSI 129

  Fly   131 -HKEAPGSSSSSNGKTNGDSEKPEKEKDHGGSGKPEKSERREKRKHEDRHSKSKRSRHHVQGSSA 194
             :.|:|             .|.|..|         |||              .||:...:|    
 Frog   130 ENDESP-------------RETPVNE---------EKS--------------LKRTFQQIQ---- 154

  Fly   195 NSAPPTEEVVSVEPENGHTPPYLPLGEPPEP---EELIRALTSIENSASSDAVVRERIAKLPQEI 256
                        |.::.:...|.|......|   |:||:||..:||:||.||.||::||.||||:
 Frog   155 ------------EEDDDYPGNYSPRDTSAGPLLTEDLIKALQDLENAASGDAAVRQKIASLPQEV 207

  Fly   257 SEISCISKLEDKDKAKELAIQVNEAVDLLNDYNARLAAEMEERSKLATMLRDFQAEQKELLSQAE 321
            .::|.:.|:.||:.|:.|:..|:||..||.:||.|||||:::|.:||.||.::...|||.||..|
 Frog   208 QDVSLLEKITDKEAAERLSKTVDEACILLAEYNGRLAAELDDRRQLAKMLMEYTQAQKETLSNKE 272

  Fly   322 QRLDEHKKKLAKMLGLQKEIHDHLSNLPDLTRLPDVTGGLAPLPSAGDLFN 372
            ::|:|:|:|||::..::||:..|:.:||||:.||:|||||||||||||||:
 Frog   273 KKLEEYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTGGLAPLPSAGDLFS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9018NP_647701.1 CID_RPRD1 4..132 CDD:340799 70/128 (55%)
CREPT 229..372 CDD:465181 75/142 (53%)
rprd1bNP_001004796.1 CID_RPRD1B 3..131 CDD:340809 70/128 (55%)
CREPT 177..323 CDD:465181 77/145 (53%)

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