DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9018 and rprd1b

DIOPT Version :10

Sequence 1:NP_647701.1 Gene:CG9018 / 38283 FlyBaseID:FBgn0035318 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_005162475.1 Gene:rprd1b / 321636 ZFINID:ZDB-GENE-030131-355 Length:336 Species:Danio rerio


Alignment Length:374 Identity:167/374 - (44%)
Similarity:232/374 - (62%) Gaps:42/374 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFMYLAND 65
            ||:|::|||.|||:||::||||:||||||:||||||:|.|||.|.|||:.....:||||:|||||
Zfish     1 MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHAALIVRVWHRELKKAKSSRKLTFLYLAND 65

  Fly    66 VIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDPKTIADWRSRL 130
            |||||||||||:.|::..||....:|:. :...|.....:.|:|.||.||.:|.|..|...:   
Zfish    66 VIQNSKKKGPEFAKDFEGVLIDACSHVA-RDGDDGCKKQMDRLLTIWQERNLYRPDFIQQLK--- 126

  Fly   131 HKEAPGSSSSSNGKTNGDSEKPEKEKDHGGSGKPEKSERREKRKHEDRHSKSKRSRHHVQGSSAN 195
                         .|..|||.| |.|..|            :|..:|| ...|||...||     
Zfish   127 -------------LTIDDSESP-KHKTAG------------QRNADDR-KNLKRSYQKVQ----- 159

  Fly   196 SAPPTEEVVSVEPENGH-TPPYLPLGEPPEPEELIRALTSIENSASSDAVVRERIAKLPQEISEI 259
                .||....:...|| :|.......|...|:|::||..:||:||.||.||::||.||||:.::
Zfish   160 ----EEEEEEDDDYRGHYSPRETDAAAPQLTEDLVKALQDLENAASGDAAVRQKIASLPQEVQDV 220

  Fly   260 SCISKL-EDKDKAKELAIQVNEAVDLLNDYNARLAAEMEERSKLATMLRDFQAEQKELLSQAEQR 323
            |.:.|: .||..|.:|:..|:||..||.:||.|||||:|:|.:||.||.::...||:.|::.|::
Zfish   221 SLLEKITADKQAADKLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLTEYIQSQKDALNEREKK 285

  Fly   324 LDEHKKKLAKMLGLQKEIHDHLSNLPDLTRLPDVTGGLAPLPSAGDLFN 372
            |:|:|:|||::..::||:..|:.:||||:.||:|||||||||||||||:
Zfish   286 LEEYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTGGLAPLPSAGDLFS 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9018NP_647701.1 CID_RPRD1 4..132 CDD:340799 67/127 (53%)
CREPT 229..372 CDD:465181 73/143 (51%)
rprd1bXP_005162475.1 CID_RPRD1B 3..131 CDD:340809 68/144 (47%)
CREPT 187..334 CDD:465181 75/146 (51%)

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