DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9018 and Rprd1a

DIOPT Version :10

Sequence 1:NP_647701.1 Gene:CG9018 / 38283 FlyBaseID:FBgn0035318 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_214609.6 Gene:Rprd1a / 291736 RGDID:1307374 Length:312 Species:Rattus norvegicus


Alignment Length:376 Identity:153/376 - (40%)
Similarity:215/376 - (57%) Gaps:70/376 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFMYLAND 65
            ||||:::||.|||:||::||||:||||||||||||||..||..|:|||......:||||:|||||
  Rat     1 MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLAND 65

  Fly    66 VIQNSKKKGPEYGKEYSLVLGKVFAHIG----EKCNSDKLLGSLGRILNIWLERGVYDPKTIADW 126
            ||||||:||||:.|:::.|:.:.|.|:.    |.|..     .|||:|:||.||.||:...:   
  Rat    66 VIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKK-----HLGRVLSIWEERSVYENDVL--- 122

  Fly   127 RSRLHKEAPGSSSSSNGKTNGDSEKPEKEKDHGGSGKPEKSERREKRKHEDRHSKSKRSRHHVQG 191
                                                        |:.||.....|..|.|     
  Rat   123 --------------------------------------------EQLKHALYGDKKTRKR----- 138

  Fly   192 SSANSAPPTEEVVSVEPENGHTPPYLPLGEPPEPEELIRALTSIENSASSDAVVRERIAKLPQEI 256
                    |.|.:.|: ||.:........|||:..:|:|||..:||:||.||.|.:|||.||.|:
  Rat   139 --------TYEQIKVD-ENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEV 194

  Fly   257 SEISCISKLEDKDKAKELAIQVNEAVDLLNDYNARLAAEMEERSKLATMLRDFQAEQKELLSQAE 321
            .|:|.:.|:.||:..:.|:..|.:|..||.|||.|||||:::|.:|..||.||...|||.|::.|
  Rat   195 QEVSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKE 259

  Fly   322 QRLDEHKKKLAKMLGLQKEIHDHLSNLPDLTRLPDVTGGLAPLPSAGDLFN 372
            .:|:|:|:|||::..::||:...:.:||||:|||:|||....||.|||:::
  Rat   260 HKLEEYKRKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9018NP_647701.1 CID_RPRD1 4..132 CDD:340799 67/131 (51%)
CREPT 229..372 CDD:465181 68/142 (48%)
Rprd1aXP_214609.6 CID_RPRD1A 4..131 CDD:340808 70/178 (39%)
CREPT 165..310 CDD:465181 69/144 (48%)

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