DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9018 and rprd2

DIOPT Version :10

Sequence 1:NP_647701.1 Gene:CG9018 / 38283 FlyBaseID:FBgn0035318 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_004917647.1 Gene:rprd2 / 100496193 XenbaseID:XB-GENE-6257583 Length:1391 Species:Xenopus tropicalis


Alignment Length:382 Identity:84/382 - (21%)
Similarity:159/382 - (41%) Gaps:78/382 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFMYLANDVIQNS 70
            :::|.:|:..:.::..|||:||.|.|.::|:.:.:|..|.:.........:|...|||||||||.
 Frog    15 EASLDRKMQSVTNTMDSIQSLSSWCIENKKYHSTVVHHWLKWFRRSGFGHRLNLFYLANDVIQNC 79

  Fly    71 KKKGPEYGKEYSLVLGKVFAHIGEKCNS----DKLLGSLGRILNIWLERGVYDPKTIADWRSRLH 131
            |:|.       ::|..:.||.:..:..|    ..:..|:.||..||.||.||....||::||.|:
 Frog    80 KRKN-------AIVYREAFAEVLPEAASLVKDASVAKSVERIFKIWEERNVYQEDVIANFRSSLN 137

  Fly   132 KEAPGSSSSSNGKTNGDSEKPEKEKDHGGSGKPEKSERREKRKHEDRHSKSKRSRHHVQGSSANS 196
            |..                     || |.|||..:|.|.:..|.::                   
 Frog   138 KSM---------------------KD-GSSGKRSRSSRPKPEKVQE------------------- 161

  Fly   197 APPTEEVVSVEPENGHTPPYLPLGEPPEPEELIRALTSIENSASSDAVVRERIAKLPQEISEISC 261
            |||.....:::.:         :.....|::||..|...:.|..:..:..::::.:..::.....
 Frog   162 APPVTPKAALKSK---------IVAEFRPQKLIDDLQVYKRSVDNVKLKEQQLSNMRVDVCSTET 217

  Fly   262 ISKLEDKDKAKELAIQVNEAVDLLNDYNARLAAEMEERSKLATMLRD----FQAEQKELLSQAEQ 322
            :.:|:||...|:.:....||...|.::...|..::.....|...|.:    ::|:.:|:    :.
 Frog   218 LKRLKDKAGGKKFSKDFEEASAKLEEFVGLLEKQVRNGPPLTEALENAGIFYEAQYREV----KV 278

  Fly   323 RLDEHKKKLAKMLGLQKEIHDHLSNLPD---------LTRLPDVTGGLAPLPSAGDL 370
            .::.:|....::..|:|::....:.|||         ....|..||..:|....||:
 Frog   279 VVNAYKTFANRVNNLKKKLDQLKATLPDPEESPVPSPTIDAPSPTGSESPFQGMGDV 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9018NP_647701.1 CID_RPRD1 4..132 CDD:340799 42/129 (33%)
CREPT 229..372 CDD:465181 27/155 (17%)
rprd2XP_004917647.1 CID_RPRD2 13..137 CDD:340798 41/128 (32%)
Herpes_BLLF1 <307..715 CDD:282904 6/29 (21%)

Return to query results.
Submit another query.