DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15820 and LDH1

DIOPT Version :10

Sequence 1:NP_647696.1 Gene:CG15820 / 38277 FlyBaseID:FBgn0035312 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_009763.2 Gene:LDH1 / 852503 SGDID:S000000408 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:136 Identity:36/136 - (26%)
Similarity:59/136 - (43%) Gaps:21/136 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GNRADRPILAIHGWLDNLGTFDRLIPLL-PDYIGVLCIDLPGHGRSSRLPPGVPYNVYDYVFI-I 87
            |.|.|...:.:.|...||..|:.|:.|: .|....|.:||||.|.||.........|.:.:|: :
Yeast    82 GIRGDTVFVFVPGLAGNLEQFEPLLELVDSDQKAFLTLDLPGFGHSSEWSDYPMLKVVELIFVLV 146

  Fly    88 PRVMKEFGWS---------------KVSLMGHSLGGVMSFMYAAMAPSTVDMIISLDVLLPRR-- 135
            ..|:::  ||               |:.|:|||:|..::........:....:.:|.:|.|.:  
Yeast   147 CDVLRK--WSTAVPNNDNVNPFNGHKIVLVGHSMGCFLACHLYEQHMADTKAVQTLVLLTPPKAH 209

  Fly   136 IEDPSK 141
            ||..||
Yeast   210 IEQLSK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15820NP_647696.1 MenH 19..300 CDD:440361 36/136 (26%)
LDH1NP_009763.2 Abhydrolase_1 87..358 CDD:395444 33/131 (25%)

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