DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15820 and AT4G12830

DIOPT Version :10

Sequence 1:NP_647696.1 Gene:CG15820 / 38277 FlyBaseID:FBgn0035312 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_567394.1 Gene:AT4G12830 / 826895 AraportID:AT4G12830 Length:393 Species:Arabidopsis thaliana


Alignment Length:139 Identity:36/139 - (25%)
Similarity:60/139 - (43%) Gaps:8/139 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RWY----GNRADRPILAIHGWLDNLGTFDRLIPLLPDYIGVLCIDLPGHGRSSRLPPGVPYN--V 80
            ||:    |:....|::.|||:.....::.:.||:|......:..|..|.|.|.:...|..:|  :
plant   122 RWFSVESGSVDSPPVILIHGFPSQAYSYRKTIPVLSKNYRAIAFDWLGFGFSDKPQAGYGFNYTM 186

  Fly    81 YDYVFIIPRVMKEFGWSKVSLMGHSLGGVMSFMYAAMAPSTVDMIISLD-VLLPRRIEDPSKLTK 144
            .::|..:...:.|...|||||:...........||...|..:..:|.|: .|.|...:.||.|:.
plant   187 DEFVSSLESFIDEVTTSKVSLVVQGYFSAAVVKYARNRPDKIKNLILLNPPLTPEHAKLPSTLSV 251

  Fly   145 DIEGYLLEE 153
             ...:||.|
plant   252 -FSNFLLGE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15820NP_647696.1 MenH 19..300 CDD:440361 36/139 (26%)
AT4G12830NP_567394.1 PLN03084 1..389 CDD:178633 36/139 (26%)

Return to query results.
Submit another query.