DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1139 and AVT2

DIOPT Version :9

Sequence 1:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_010850.1 Gene:AVT2 / 856645 SGDID:S000000790 Length:480 Species:Saccharomyces cerevisiae


Alignment Length:516 Identity:98/516 - (18%)
Similarity:203/516 - (39%) Gaps:127/516 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NDDIKT---VTVYP----------------TTLELTTPTKSANGSNDDYDPHQHRELKNPTTNFQ 47
            |.:::|   :|.:|                .:|.:.||.......||..     ||....::...
Yeast    12 NKELRTEFELTNFPFPGTTDNDSDDGSQGQNSLNIITPDMDDTLVNDVL-----RENDKKSSMRM 71

  Fly    48 TFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGSLALYCLHILIKCMYILCKRQ---RVPY 109
            .|.:...:.:|.|::..|.|..:||.:.|.|..:.:|.:..:.|.:::..:.:..||.   .|.:
Yeast    72 AFMNLANSILGAGIITQPFAIKNAGILGGLLSYVALGFIVDWTLRLIVINLTLAGKRTYQGTVEH 136

  Fly   110 VSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGICCVYVVFIAESIKQLV-------DE 167
            |       :|.|         ..:.:.|.:|..|   ||.|..|.:.|.::|..::       |.
Yeast   137 V-------MGKK---------GKLLILFTNGLFA---FGGCIGYCIIIGDTIPHVLRAIFSQNDG 182

  Fly   168 YLVVWDVRIHMCIIIVPLLLIYSI---KNLKLLAPFSSAANLLLLVGFGIILYYIFEELPPLSER 229
            .:..| :|.::.|::|...:.:.:   :|::.|    |.|:.|.::...||:..:....|.|   
Yeast   183 NVHFW-LRRNVIIVMVTTFISFPLSMKRNIEAL----SKASFLAVISMIIIVLTVVIRGPML--- 239

  Fly   230 DPFVAAG---KLPTFF--GTVLFALEAVGVILAIEENMATPKSFVGPCGILN---------SGMS 280
             |:...|   ||..||  .|:..:|..:...|....|    .||:. ..:.|         :.:|
Yeast   240 -PYDWKGHSLKLSDFFMKATIFRSLSVISFALVCHHN----TSFIF-FSMRNRSVAKFTRLTHIS 298

  Fly   281 IVLGLY--VLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWISYALQGY----VTA 339
            |::.:.  .|:|:.|:..:..:::|::..:.|.::....:.::.|......::.::.:    |..
Yeast   299 IIISVICCALMGYSGFAVFKEKTKGNVLNSFPGTDTAINIARLCFGFNMLTTFPMEIFVLRDVVG 363

  Fly   340 HILWDKYLAKRFKETRQTF--YELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIFPV 402
            ::|.:..|.|.:.|..|..  ..::..:.:|.:|.|.::...:|.....|:|:...|.:..|.| 
Yeast   364 NLLHECNLIKNYDEHTQLSGKQHVVITSSLVFITMGISLTTCNLGALFELIGATTASTMAYILP- 427

  Fly   403 LLQICVQYTEGYGPFRIKLIINLLL----------------LCFGIFGGVVGTYVSILDII 447
                  .||            ||||                :|||....::.:..:|:|.:
Yeast   428 ------PYT------------NLLLTSKKKSWKERLPFYLCICFGFMIMIISSTQTIIDAV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1139NP_647686.1 SdaC 36..404 CDD:223884 78/402 (19%)
SLC5-6-like_sbd 42..444 CDD:294310 85/452 (19%)
AVT2NP_010850.1 Aa_trans 65..467 CDD:279788 85/453 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.